RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PTP4A1Q93096 173 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ST6GAL2Q96JF0 529 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 SGK494Q96LW2 274 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 URM1Q9BTM9 101 aaKnown RBP2.86□□□□□ -1.95
SCFD1-213ENST00000554776 UTP14AQ9BVJ6 771 aaKnown RBP2.86□□□□□ -1.95
SCFD1-213ENST00000554776 DNAI2Q9GZS0 605 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 TFB2MQ9H5Q4 396 aaKnown RBP2.86□□□□□ -1.95
SCFD1-213ENST00000554776 Q9H8V8 135 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 LMAN1LQ9HAT1 526 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF701Q9NV72 531 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ITGA11Q9UKX5 1188 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 SLC7A7Q9UM01 511 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ANKRD61A6NGH8 418 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 ERVV-2B6SEH9 535 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 CCL24O00175 119 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF263O14978 683 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 CTDSPLO15194 276 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 RPS6KA5O75582 802 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 PGLSO95336 258 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 SIX3O95343 332 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-213ENST00000554776 SERPING1P05155 500 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 INHBAP08476 426 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 SPP1P10451 314 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 IRF2P14316 349 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 EPCAMP16422 314 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 SLC6A6P31641 620 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 HSD17B3P37058 310 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 NME5P56597 212 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 LINC01547P58512 204 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-213ENST00000554776 GCNT1Q02742 428 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 FOLH1Q04609 750 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 LGALS3BPQ08380 585 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 DMP1Q13316 513 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-213ENST00000554776 SQLEQ14534 574 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 NPTX1Q15818 432 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 PTGISQ16647 500 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 ODF4Q2M2E3 257 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 TYSND1Q2T9J0 566 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 SLC10A5Q5PT55 438 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 OTUD3Q5T2D3 398 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-213ENST00000554776 CYP4A22Q5TCH4 519 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 TXNRD3NBQ6F5E7 133 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 BTNL8Q6UX41 500 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 PIGWQ7Z7B1 504 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 PLD3Q8IV08 490 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 CROCCP3Q8IVE0 287 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 TIGD4Q8IY51 512 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 KLHDC1Q8N7A1 406 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 MAPKAPK5-AS1Q8N8E1 139 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 PPFIBP2Q8ND30 876 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 C9orf43Q8TAL5 461 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-213ENST00000554776 LRRC8CQ8TDW0 803 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 HSD17B8Q92506 261 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 ERO1AQ96HE7 468 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF354BQ96LW1 612 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 HNRNPABQ99729 332 aaKnown RBP2.85□□□□□ -1.95
SCFD1-213ENST00000554776 RHNO1Q9BSD3 238 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 CACNG6Q9BXT2 260 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 TMEM206Q9H813 350 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 PHPT1Q9NRX4 125 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-213ENST00000554776 CNIH4Q9P003 139 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 MTRRQ9UBK8 725 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 GMEB2Q9UKD1 530 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 CDH7Q9ULB5 785 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 HBS1LQ9Y450 684 aaKnown RBP2.85□□□□□ -1.95
SCFD1-213ENST00000554776 SMCHD1A6NHR9 2005 aa2.85□□□□□ -1.95
SCFD1-213ENST00000554776 LOC101059948A0A1B0GTJ6 334 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 YDJCA8MPS7 323 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 PRSS46E5RG02 174 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 IFIT3O14879 490 aaKnown RBP2.84□□□□□ -1.95
SCFD1-213ENST00000554776 STX6O43752 255 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 SOCS5O75159 536 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 LUC7L3O95232 432 aaKnown RBP2.84□□□□□ -1.95
SCFD1-213ENST00000554776 DARSP14868 501 aaKnown RBP2.84□□□□□ -1.95
SCFD1-213ENST00000554776 ATP6V1B1P15313 513 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 ITIH1P19827 911 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 CDH3P22223 829 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 CA4P22748 312 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 TIA1P31483 386 aaKnown RBP eCLIP2.84□□□□□ -1.95
SCFD1-213ENST00000554776 RGS19P49795 217 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 MFAP3P55082 362 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 ADARP55265 1226 aaKnown RBP2.84□□□□□ -1.95
SCFD1-213ENST00000554776 SMU1Q2TAY7 513 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 IQCCQ4KMZ1 466 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 SUSD4Q5VX71 490 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 CASC4Q6P4E1 433 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF449Q6P9G9 518 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 PODNL1Q6PEZ8 512 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 C11orf88Q6PI97 169 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 TMEM270Q6UE05 265 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 PRSS55Q6UWB4 352 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-213ENST00000554776 C15orf39Q6ZRI6 1047 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 LINC00696Q6ZRV3 163 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 SLC26A9Q7LBE3 791 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 RASGEF1AQ8N9B8 481 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF383Q8NA42 475 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 OR10Q1Q8NGQ4 319 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 SNX21Q969T3 373 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 PYCR2Q96C36 320 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 SLC47A1Q96FL8 570 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms