RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ARHGEF19Q8IW93 802 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 NAGSQ8N159 534 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 TMEM132CQ8N3T6 1108 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 C1orf131Q8NDD1 294 aaKnown RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 THAP4Q8WY91 577 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 NACC2Q96BF6 587 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 C18orf8Q96DM3 657 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 LRRC46Q96FV0 321 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 CCDC34Q96HJ3 373 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 FAM81BQ96LP2 452 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 SLC25A23Q9BV35 468 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 TWSG1Q9GZX9 223 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 SYNCQ9H7C4 482 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 WDR26Q9H7D7 661 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 APMAPQ9HDC9 416 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 MLXIPLQ9NP71 852 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 UBE2TQ9NPD8 197 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 RMND1Q9NWS8 449 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 KCTD5Q9NXV2 234 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 TMEM9Q9P0T7 183 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 PADI1Q9ULC6 663 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 ENTPD4Q9Y227 616 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 MTO1Q9Y2Z2 717 aaKnown RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 MRPS18BQ9Y676 258 aaKnown RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 SPTBN1Q01082 2364 aaKnown RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 TDRD6O60522 2096 aaKnown RBP4.78□□□□□ -1.64
ATXN3-228ENST00000554592 LOC102723971A0A1B0GUV8 181 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 A0A1W2PS29 197 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 INSIG1O15503 277 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 PIP5K1CO60331 668 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 DPM1O60762 260 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 CBX6O95503 412 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 NDST3O95803 873 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 MT-ND3P03897 115 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 ACVR2AP27037 513 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 AK4P27144 223 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-228ENST00000554592 GABRB3P28472 473 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 KRT9P35527 623 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 DEKP35659 375 aaKnown RBP4.78□□□□□ -1.64
ATXN3-228ENST00000554592 MMP12P39900 470 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 USP8P40818 1118 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 GNPDA1P46926 289 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 FASLGP48023 281 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 CCL11P51671 97 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 NDUFA8P51970 172 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 POLR2LP62875 67 aaKnown RBP4.78□□□□□ -1.64
ATXN3-228ENST00000554592 DYRK1AQ13627 763 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 SLC29A2Q14542 456 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 IL11RAQ14626 422 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 CYTH1Q15438 398 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 CCDC40Q4G0X9 1142 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 ZRANB3Q5FWF4 1079 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 SP5Q6BEB4 398 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-228ENST00000554592 RWDD4Q6NW29 188 aaKnown RBP4.78□□□□□ -1.64
ATXN3-228ENST00000554592 LEKR1Q6ZMV7 388 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 KCTD20Q7Z5Y7 419 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 CLNKQ7Z7G1 428 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 SLC47A2Q86VL8 602 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 NLRP14Q86W24 1093 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 ZNF354CQ86Y25 554 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 DNAAF5Q86Y56 855 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 PDCD6IPQ8WUM4 868 aaKnown RBP4.78□□□□□ -1.64
ATXN3-228ENST00000554592 IPCEF1Q8WWN9 437 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-228ENST00000554592 PATE1Q8WXA2 126 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 NCSTNQ92542 709 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 SH3KBP1Q96B97 665 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 NCAPGQ9BPX3 1015 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 STK33Q9BYT3 514 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 ACP6Q9NPH0 428 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 PHPT1Q9NRX4 125 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-228ENST00000554592 TMEM248Q9NWD8 314 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 OR12D3Q9UGF7 316 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 KCNE5Q9UJ90 142 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 SHOC2Q9UQ13 582 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 NEU2Q9Y3R4 380 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 CACNA1DQ01668 2161 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 ZFC3H1O60293 1989 aaKnown RBP4.78□□□□□ -1.64
ATXN3-228ENST00000554592 DOPEY1Q5JWR5 2465 aa4.78□□□□□ -1.64
ATXN3-228ENST00000554592 TRPM6Q9BX84 2022 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 ARHGAP10A1A4S6 786 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 HEATR9A2RTY3 570 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 FAM234BA2RU67 622 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 A6NCN8 305 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 TMEM191CA6NGB0 347 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 C21orf140B9A014 251 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 E7ENX8 843 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 PIGNO95427 931 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 GNA14O95837 355 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 IVLP07476 585 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 PLEKP08567 350 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 ANKRD34CP0C6C1 535 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 ELFN1P0C7U0 828 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 PRF1P14222 555 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 TYRP1P17643 537 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 NFKBIAP25963 317 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 ADRA1BP35368 520 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 GARSP41250 739 aaKnown RBP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 ACTR1BP42025 376 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 HALP42357 657 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 GABRB2P47870 512 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms