RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 SEMA4CQ9C0C4 833 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 CHST8Q9H2A9 424 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 PPANQ9NQ55 473 aaKnown RBP12.56□□□□□ -0.4
SHMT2-211ENST00000554310 EURLQ9NYK6 297 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 TAS2R13Q9NYV9 303 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-211ENST00000554310 KLK4Q9Y5K2 254 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 A0A1W2PPV9 198 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 TARM1B6A8C7 271 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 C9J4A7 227 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 HCRTR1O43613 425 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 RAB40ALP0C0E4 278 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 FAM87AP0C7U9 286 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 GABRB3P28472 473 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 PMS2P54278 862 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 GYS2P54840 703 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 POLE2P56282 527 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 SP140Q13342 867 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 COL9A2Q14055 689 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-211ENST00000554310 HP1BP3Q5SSJ5 553 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-211ENST00000554310 TEDDM1Q5T9Z0 273 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 ATP1A1-AS1Q5TC04 95 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 RHBDD2Q6NTF9 364 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 FAM199XQ6PEV8 388 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-211ENST00000554310 TRMT10BQ6PF06 316 aaKnown RBP12.55□□□□□ -0.4
SHMT2-211ENST00000554310 FAM198BQ6UWH4 519 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 PIWIL4Q7Z3Z4 852 aaKnown RBP12.55□□□□□ -0.4
SHMT2-211ENST00000554310 FAM20CQ8IXL6 584 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 EXD3Q8N9H8 876 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 FBXO36Q8NEA4 188 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 OR2A1Q8NGT9 310 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 FAM76AQ8TAV0 307 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 PROKR1Q8TCW9 393 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 UBLCP1Q8WVY7 318 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-211ENST00000554310 APOBEC4Q8WW27 367 aaKnown RBP12.55□□□□□ -0.4
SHMT2-211ENST00000554310 SMPDL3AQ92484 453 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 ZUFSPQ96AP4 578 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 MIPEPQ99797 713 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 TSPYL1Q9H0U9 437 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 AKIRIN1Q9H9L7 192 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-211ENST00000554310 TMBIM4Q9HC24 238 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 ENAMQ9NRM1 1142 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 IRAK4Q9NWZ3 460 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 GEMIN8Q9NWZ8 242 aaKnown RBP12.55□□□□□ -0.4
SHMT2-211ENST00000554310 ZFATQ9P243 1243 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 SLC17A6Q9P2U8 582 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 TUBD1Q9UJT1 453 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 POLHQ9Y253 713 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 KLHL20Q9Y2M5 609 aa12.55□□□□□ -0.4
SHMT2-211ENST00000554310 HEATR5BQ9P2D3 2071 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 CDC14CA4D256 554 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 HMGB1P1B2RPK0 211 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-211ENST00000554310 GFYI3L273 518 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 EIF3HO15372 352 aaKnown RBP eCLIP12.54□□□□□ -0.4
SHMT2-211ENST00000554310 ZBTB14O43829 449 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 CCNDBP1O95273 360 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 AHSGP02765 367 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 NUDT17P0C025 328 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 AGXTP21549 392 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 PSMB5P28074 263 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 CMPK1P30085 196 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 RPA3P35244 121 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-211ENST00000554310 GRIA3P42263 894 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 PNLIPRP1P54315 467 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 MGAT5Q09328 741 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 ERV3-1Q14264 604 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 FASTKD3Q14CZ7 662 aaKnown RBP12.54□□□□□ -0.4
SHMT2-211ENST00000554310 NCF4Q15080 339 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 UGT8Q16880 541 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 DEFB109BQ30KR1 87 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 PTCHD3Q3KNS1 767 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 TTMPQ5BVD1 217 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 RBM20Q5T481 1227 aaKnown RBP12.54□□□□□ -0.4
SHMT2-211ENST00000554310 AGBL2Q5U5Z8 902 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 ZNF385CQ66K41 422 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-211ENST00000554310 FCRL6Q6DN72 434 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 FAM45BPQ6NSW5 357 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 FIGLAQ6QHK4 219 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 CROCCP2Q86T23 111 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 ANKMY2Q8IV38 441 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 ZBED8Q8IZ13 594 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 ZNF655Q8N720 491 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-211ENST00000554310 ENDOVQ8N8Q3 282 aaKnown RBP12.54□□□□□ -0.4
SHMT2-211ENST00000554310 FAM45AQ8TCE6 357 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 DLG3Q92796 817 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 ARL8AQ96BM9 186 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 GBP5Q96PP8 586 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 PKP4Q99569 1192 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 NDC1Q9BTX1 674 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 DHRS4Q9BTZ2 278 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 NLNQ9BYT8 704 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 PHACTR1Q9C0D0 580 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 SPRTNQ9H040 489 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-211ENST00000554310 TXLNGQ9NUQ3 528 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 ANKMY1Q9P2S6 941 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 SNX7Q9UNH6 387 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 FARSAQ9Y285 508 aaKnown RBP12.54□□□□□ -0.4
SHMT2-211ENST00000554310 PADI2Q9Y2J8 665 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 PCM1Q15154 2024 aa12.54□□□□□ -0.4
SHMT2-211ENST00000554310 BOD1L1Q8NFC6 3051 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms