RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ZBTB20Q9HC78 741 aaPredicted RBP17.93■□□□□ 0.46
CPSF2-203ENST00000554290 AGPAT4Q9NRZ5 378 aa17.93■□□□□ 0.46
CPSF2-203ENST00000554290 SAMD15Q9P1V8 674 aa17.93■□□□□ 0.46
CPSF2-203ENST00000554290 TSR3Q9UJK0 312 aaKnown RBP17.93■□□□□ 0.46
CPSF2-203ENST00000554290 CRYL1Q9Y2S2 319 aa17.93■□□□□ 0.46
CPSF2-203ENST00000554290 A0A1W2PPV9 198 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 OR2A25A4D2G3 310 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 KRT87PA6NCN2 255 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 ANKUB1A6NFN9 424 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 VSTM2BA6NLU5 285 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 E5RI56 91 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 PHF2O75151 1096 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 ARHGAP19Q14CB8 494 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 CRB2Q5IJ48 1285 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 NEPROQ6NW34 567 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 CASC4Q6P4E1 433 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 RNF44Q7L0R7 432 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 CUZD1Q86UP6 607 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 PARP9Q8IXQ6 854 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 OR11G2Q8NGC1 345 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 PPP4R1Q8TF05 950 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 INPP5DQ92835 1189 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 FAM136AQ96C01 138 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 MIEF2Q96C03 454 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 CRB3Q9BUF7 120 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 ACAT2Q9BWD1 397 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 EPS8L2Q9H6S3 715 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 ZNF282Q9UDV7 671 aaPredicted RBP17.92■□□□□ 0.46
CPSF2-203ENST00000554290 CDC14AQ9UNH5 594 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 PCDHGA10Q9Y5H3 936 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 SNRNP200O75643 2136 aaKnown RBP17.92■□□□□ 0.46
CPSF2-203ENST00000554290 ESPL1Q14674 2120 aa17.92■□□□□ 0.46
CPSF2-203ENST00000554290 LOC105369274A0A096LPK9 316 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 LOC102723532A0A0G2JNH3 316 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 TCRBV7S3A2A0A539 114 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 ALOX12BO75342 701 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 VPS26AO75436 327 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 CATP04040 527 aaKnown RBP17.91■□□□□ 0.46
CPSF2-203ENST00000554290 PKMP14618 531 aaKnown RBP17.91■□□□□ 0.46
CPSF2-203ENST00000554290 CXCR5P32302 372 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 RPA3P35244 121 aaPredicted RBP17.91■□□□□ 0.46
CPSF2-203ENST00000554290 HSD17B2P37059 387 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 EMP3P54852 163 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 KLC1Q07866 573 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 FASTKQ14296 549 aaKnown RBP17.91■□□□□ 0.46
CPSF2-203ENST00000554290 TRIP13Q15645 432 aaPredicted RBP17.91■□□□□ 0.46
CPSF2-203ENST00000554290 HIF1AQ16665 826 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 KLHL38Q2WGJ6 581 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 IGFL2Q6UWQ7 119 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 OR4N4Q8N0Y3 316 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 DNAJB14Q8TBM8 379 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 STT3BQ8TCJ2 826 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 BARD1Q99728 777 aaKnown RBP17.91■□□□□ 0.46
CPSF2-203ENST00000554290 MRPS30Q9NP92 439 aaKnown RBP17.91■□□□□ 0.46
CPSF2-203ENST00000554290 INTS10Q9NVR2 710 aaKnown RBP17.91■□□□□ 0.46
CPSF2-203ENST00000554290 UTP6Q9NYH9 597 aaKnown RBP17.91■□□□□ 0.46
CPSF2-203ENST00000554290 CCDC88CQ9P219 2028 aa17.91■□□□□ 0.46
CPSF2-203ENST00000554290 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.9■□□□□ 0.46
CPSF2-203ENST00000554290 MAGEB16A2A368 324 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 ZNF839A8K0R7 811 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 ARHGEF33A8MVX0 844 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 MYO1CO00159 1063 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 PRPF4O43172 522 aaKnown RBP eCLIP17.9■□□□□ 0.46
CPSF2-203ENST00000554290 AVILO75366 819 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 PSIP1O75475 530 aaKnown RBP17.9■□□□□ 0.46
CPSF2-203ENST00000554290 ZGLP1P0C6A0 271 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 ERGP11308 486 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 ACPPP15309 386 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 FBLP22087 321 aaKnown RBP17.9■□□□□ 0.46
CPSF2-203ENST00000554290 TERF1P54274 439 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 GPS1Q13098 491 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 TSTA3Q13630 321 aaPredicted RBP17.9■□□□□ 0.46
CPSF2-203ENST00000554290 KCNJ11Q14654 390 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 TTLL9Q3SXZ7 439 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 ACSBG2Q5FVE4 666 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 HIST2H2BCQ6DN03 193 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 FBXO42Q6P3S6 717 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 CENPUQ71F23 418 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 CILP2Q8IUL8 1156 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 DTWD1Q8N5C7 304 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 PRELID2Q8N945 189 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 THOC3Q96J01 351 aaKnown RBP17.9■□□□□ 0.46
CPSF2-203ENST00000554290 CABS1Q96KC9 395 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 PLCD4Q9BRC7 762 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 C3orf18Q9UK00 162 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 NOVA2Q9UNW9 492 aaKnown RBP17.9■□□□□ 0.46
CPSF2-203ENST00000554290 SLC5A6Q9Y289 635 aa17.9■□□□□ 0.46
CPSF2-203ENST00000554290 SPTAN1Q13813 2472 aaKnown RBP17.9■□□□□ 0.46
CPSF2-203ENST00000554290 A1L4Q6 167 aa17.89■□□□□ 0.45
CPSF2-203ENST00000554290 H0YGG7 62 aa17.89■□□□□ 0.45
CPSF2-203ENST00000554290 MAP2K7O14733 419 aa17.89■□□□□ 0.45
CPSF2-203ENST00000554290 NRP2O60462 931 aa17.89■□□□□ 0.45
CPSF2-203ENST00000554290 USP1O94782 785 aa17.89■□□□□ 0.45
CPSF2-203ENST00000554290 CCNDBP1O95273 360 aa17.89■□□□□ 0.45
CPSF2-203ENST00000554290 HPP00738 406 aa17.89■□□□□ 0.45
CPSF2-203ENST00000554290 MLNP12872 115 aa17.89■□□□□ 0.45
CPSF2-203ENST00000554290 MAGEA6P43360 314 aa17.89■□□□□ 0.45
CPSF2-203ENST00000554290 VPS41P49754 854 aa17.89■□□□□ 0.45
CPSF2-203ENST00000554290 ARF3P61204 181 aaPredicted RBP17.89■□□□□ 0.45
CPSF2-203ENST00000554290 YBX1P67809 324 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms