RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 PRR23BQ6ZRT6 265 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 TMEM26Q6ZUK4 368 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 ACAD11Q709F0 780 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 C17orf64Q86WR6 236 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 CDYL2Q8N8U2 506 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 GBP7Q8N8V2 638 aaPredicted RBP7.39□□□□□ -1.23
TDP1-209ENST00000554180 GPR156Q8NFN8 814 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 ABHD11Q8NFV4 315 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 CEP70Q8NHQ1 597 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 ACTRT2Q8TDY3 377 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 USP7Q93009 1102 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 NEIL2Q969S2 332 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 UBE2E3Q969T4 207 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 REPS1Q96D71 796 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 THOC1Q96FV9 657 aaKnown RBP7.39□□□□□ -1.23
TDP1-209ENST00000554180 CDK15Q96Q40 435 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 FRG2BQ96QU4 278 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 KCNA7Q96RP8 456 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 PRRX2Q99811 253 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 DUSP23Q9BVJ7 150 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 NUF2Q9BZD4 464 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 SRMSQ9H3Y6 488 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 TCF7L2Q9NQB0 619 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 TAC3Q9UHF0 121 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 RAB23Q9ULC3 237 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 SLC6A14Q9UN76 642 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 SNX6Q9UNH7 406 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 TRIM33Q9UPN9 1127 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 RNF11Q9Y3C5 154 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 TSC22D4Q9Y3Q8 395 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 PCDHB11Q9Y5F2 797 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 PCDHGA11Q9Y5H2 935 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 CABIN1Q9Y6J0 2220 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 ANKRD12Q6UB98 2062 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 CEP192Q8TEP8 1941 aa7.39□□□□□ -1.23
TDP1-209ENST00000554180 KMT2EQ8IZD2 1858 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 FAM86C2PA6NEL3 165 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 NPIPB8E9PQR5 432 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 MANBAO00462 879 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 EBAG9O00559 213 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 SDHDO14521 159 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 ARHGAP33O14559 1287 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 PIP5K1BO14986 540 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 SLC22A2O15244 555 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 NUDT21O43809 227 aaKnown RBP7.38□□□□□ -1.23
TDP1-209ENST00000554180 PRICKLE3O43900 615 aaPredicted RBP7.38□□□□□ -1.23
TDP1-209ENST00000554180 PRAMEF4O60810 478 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 CCDC22O60826 627 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 SDC3O75056 442 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 SKAP2O75563 359 aaPredicted RBP7.38□□□□□ -1.23
TDP1-209ENST00000554180 SERPINA6P08185 405 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 SYPP08247 313 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 C1GALT1C1LP0DN25 315 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 ALPPL2P10696 532 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 HSD3B1P14060 373 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 PCSK2P16519 638 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 CD22P20273 847 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 HSD3B2P26439 372 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 GSTM2P28161 218 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 SERPINB1P30740 379 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 CCT8P50990 548 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 CCR8P51685 355 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 PRDX1Q06830 199 aaKnown RBP7.38□□□□□ -1.23
TDP1-209ENST00000554180 IFT88Q13099 833 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 TUBB3Q13509 450 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 TSTA3Q13630 321 aaPredicted RBP7.38□□□□□ -1.23
TDP1-209ENST00000554180 DOC2AQ14183 400 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 SHBQ15464 509 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 ZRSR2Q15696 482 aaKnown RBP7.38□□□□□ -1.23
TDP1-209ENST00000554180 CPSF6Q16630 551 aaKnown RBP eCLIP7.38□□□□□ -1.23
TDP1-209ENST00000554180 SMU1Q2TAY7 513 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 HLA-BQ31612 363 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 SLC9B1Q4ZJI4 515 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 TRIM61Q5EBN2 209 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 SPDYAQ5MJ70 313 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 PRAMEF9Q5VWM5 478 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 FAM91A1Q658Y4 838 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 LAIR1Q6GTX8 287 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 OGFOD2Q6N063 350 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 NXPE4Q6UWF7 544 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 KANSL1Q7Z3B3 1105 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 TRIM46Q7Z4K8 759 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 TMPRSS11BQ86T26 416 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 FAM129CQ86XR2 697 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 MYLK4Q86YV6 388 aaPredicted RBP7.38□□□□□ -1.23
TDP1-209ENST00000554180 LAS2Q8IYD9 372 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 ADGRF3Q8IZF5 1079 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 KRT78Q8N1N4 520 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 ARL14Q8N4G2 192 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 ARL10Q8N8L6 244 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 DCBLD1Q8N8Z6 715 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 LMNTD1Q8N9Z9 388 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 OR2A1Q8NGT9 310 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 WDR20Q8TBZ3 569 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 PATE1Q8WXA2 126 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 CCT6BQ92526 530 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 RILPQ96NA2 401 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 LRRC37BQ96QE4 947 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 EBF4Q9BQW3 602 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 EPB41L1Q9H4G0 881 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms