RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 DDAH2O95865 285 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 ALAS2P22557 587 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 CMPK1P30085 196 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 BDKRB1P46663 353 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 KCNJ1P48048 391 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 CARSP49589 748 aaKnown RBP6.32□□□□□ -1.4
SLIRP-203ENST00000554074 SLC9A5Q14940 896 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 CYP1B1Q16678 543 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 MUM1Q2TAK8 710 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 PRTGQ2VWP7 1150 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 PLEKHN1Q494U1 663 aaPredicted RBP6.32□□□□□ -1.4
SLIRP-203ENST00000554074 ANKRD20A4Q4UJ75 823 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 CRB2Q5IJ48 1285 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 WASHC2DQ5SRD0 308 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 PRAMEF13Q5VWM6 474 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 NEPROQ6NW34 567 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 KIRREL2Q6UWL6 708 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 IGFL2Q6UWQ7 119 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 CENPUQ71F23 418 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 COX15Q7KZN9 410 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 TAX1BP1Q86VP1 789 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 CILP2Q8IUL8 1156 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 LMNTD2Q8IXW0 634 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 ZADH2Q8N4Q0 377 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 C2orf73Q8N5S3 287 aaPredicted RBP6.32□□□□□ -1.4
SLIRP-203ENST00000554074 OTUD6BQ8N6M0 293 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 PRELID2Q8N945 189 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 MCUQ8NE86 351 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 OR9A1PQ8NGU1 263 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 PPP4R1Q8TF05 950 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 SSC4DQ8WTU2 575 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 SKA2Q8WVK7 121 aaPredicted RBP6.32□□□□□ -1.4
SLIRP-203ENST00000554074 SMPDL3AQ92484 453 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 MVB12AQ96EY5 273 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 RUNDC3BQ96NL0 473 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 OSBPL9Q96SU4 736 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 LRRC4CQ9HCJ2 640 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 XAB2Q9HCS7 855 aaKnown RBP6.32□□□□□ -1.4
SLIRP-203ENST00000554074 SLC6A20Q9NP91 592 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 FAM114A2Q9NRY5 505 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 UTP6Q9NYH9 597 aaKnown RBP6.32□□□□□ -1.4
SLIRP-203ENST00000554074 SAMD15Q9P1V8 674 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 CDC23Q9UJX2 597 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 KLHL20Q9Y2M5 609 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 HS3ST3B1Q9Y662 390 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 NFS1Q9Y697 457 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 SAR1BQ9Y6B6 198 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 SPENQ96T58 3664 aaKnown RBP6.32□□□□□ -1.4
SLIRP-203ENST00000554074 CRYBG3Q68DQ2 2970 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 ITPR2Q14571 2701 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 PCNX1Q96RV3 2341 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CENPEQ02224 2701 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 TCRBV7S3A2A0A539 114 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 WIPF3A6NGB9 483 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 SDR42E2A6NKP2 422 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 USP27XA6NNY8 438 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 ARHGEF33A8MVX0 844 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 E5RI56 91 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 PGRMC1O00264 195 aaKnown RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 EIF3FO00303 357 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 TXNDC9O14530 226 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 PRPF4O43172 522 aaKnown RBP eCLIP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CEP104O60308 925 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 NIPSNAP2O75323 286 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 VPS26AO75436 327 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CCNDBP1O95273 360 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 HPP00738 406 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CATP04040 527 aaKnown RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 MPC1LP0DKB6 136 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 PYGBP11216 843 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 ENO3P13929 434 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 PKMP14618 531 aaKnown RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 MCM3P25205 808 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 PSMB5P28074 263 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CASQ1P31415 396 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 FMO4P31512 558 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 PAFAH1B1P43034 410 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 MAGEA3P43357 314 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CLCN7P51798 805 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 VSX2P58304 361 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 ABATP80404 500 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 GPS1Q13098 491 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 TTLL9Q3SXZ7 439 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 TUBB8Q3ZCM7 444 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CCSMST1Q4G0I0 132 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 PRR30Q53SZ7 412 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 AGAP7PQ5VUJ5 663 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 IRAK1BP1Q5VVH5 260 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 GARNL3Q5VVW2 1013 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 B3GNTL1Q67FW5 361 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 ZNF425Q6IV72 752 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 FBXO42Q6P3S6 717 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CNSTQ6PJW8 725 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CAND1Q86VP6 1230 aaKnown RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 OR11G2Q8NGC1 345 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CALML6Q8TD86 181 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 GRK7Q8WTQ7 553 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 KCNJ9Q92806 393 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 SNRNP40Q96DI7 357 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms