RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, human

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-204	ENST00000554062	TMEM219	Q86XT9	240 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	CCDC83	Q8IWF9	413 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	DNAJC10	Q8IXB1	793 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	FBXL14	Q8N1E6	418 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	AMER3	Q8N944	861 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	NEXN-AS1	Q8NBZ9	246 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	NPEPL1	Q8NDH3	523 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	SPATA22	Q8NHS9	363 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	SLC20A1	Q8WUM9	679 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	BICD1	Q96G01	975 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	NAP1L3	Q99457	506 aa	Predicted RBP	4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	ARRDC1-AS1	Q9H2J1	176 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	APOBEC3G	Q9HC16	384 aa	Known RBP	4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	CHST11	Q9NPF2	352 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	GPR173	Q9NS66	373 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	HPF1	Q9NWY4	346 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	PKD2L2	Q9NZM6	624 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	ZDHHC2	Q9UIJ5	367 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	AGTPBP1	Q9UPW5	1226 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	OR2W1	Q9Y3N9	320 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	PDS5A	Q29RF7	1337 aa	Known RBP	4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	SCAPER	Q9BY12	1400 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	ZNF518A	Q6AHZ1	1483 aa		4.37	□□□□□ -1.71
PABPN1-204	ENST00000554062	SAMD9L	Q8IVG5	1584 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	DIP2C	Q9Y2E4	1556 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	ITSN2	Q9NZM3	1697 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062		A0A0B4J203	849 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062		A0A0G2JPF8	293 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	SLC9B1P1	A6NJY1	282 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	HNRNPCL3	B7ZW38	293 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	SYNGR3	O43761	229 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	ATP6AP2	O75787	350 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	HNRNPCL4	P0DMR1	293 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	HSPA8	P11142	646 aa	Known RBP	4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	PIK3R1	P27986	724 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	ABCG1	P45844	678 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	GLIPR1	P48060	266 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	STARD6	P59095	220 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	BPIFB3	P59826	476 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	PITX1	P78337	314 aa	Predicted RBP	4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	AKAP17A	Q02040	695 aa	Known RBP	4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	FOLH1	Q04609	750 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	REL	Q04864	619 aa	Predicted RBP	4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	WASHC5	Q12768	1159 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	DLG1	Q12959	904 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	SNTA1	Q13424	505 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	STXBP2	Q15833	593 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	CA9	Q16790	459 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	CTU2	Q2VPK5	515 aa	Known RBP	4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	LACTB2	Q53H82	288 aa	Predicted RBP	4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	NHLRC1	Q6VVB1	395 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	CREB3L2	Q70SY1	520 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	CATSPER4	Q7RTX7	472 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	RABEPK	Q7Z6M1	372 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	PIGW	Q7Z7B1	504 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	ANKRD46	Q86W74	232 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	MEX3D	Q86XN8	651 aa	Known RBP	4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	KLHDC8A	Q8IYD2	350 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	OR4K1	Q8NGD4	311 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	IRGQ	Q8WZA9	623 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	TBC1D31	Q96DN5	1066 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	SGF29	Q96ES7	293 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	LINGO1	Q96FE5	620 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	ADGRG7	Q96K78	797 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	RUFY1	Q96T51	708 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	PCYT2	Q99447	389 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	RAD9A	Q99638	391 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	C17orf62	Q9BQA9	187 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	LRRC1	Q9BTT6	524 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	TM6SF1	Q9BZW5	370 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	SPRTN	Q9H040	489 aa	Predicted RBP	4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	ZMYND12	Q9H0C1	365 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	C1orf21	Q9H246	121 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	ACTL8	Q9H568	366 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062		Q9H8V8	135 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	EBF2	Q9HAK2	575 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	TRPC7	Q9HCX4	862 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	DNAJC4	Q9NNZ3	241 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	CYP39A1	Q9NYL5	469 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	SLC7A7	Q9UM01	511 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	JRKL	Q9Y4A0	524 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	PCDH11Y	Q9BZA8	1340 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	TRAPPC8	Q9Y2L5	1435 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	ATP10A	O60312	1499 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	PTPRM	P28827	1452 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	TIAM1	Q13009	1591 aa		4.36	□□□□□ -1.71
PABPN1-204	ENST00000554062	ABCA6	Q8N139	1617 aa		4.35	□□□□□ -1.71
PABPN1-204	ENST00000554062		A0A1W2PPI3	338 aa		4.35	□□□□□ -1.71
PABPN1-204	ENST00000554062	SYCE3	A1L190	88 aa		4.35	□□□□□ -1.71
PABPN1-204	ENST00000554062		F8VVB4	439 aa		4.35	□□□□□ -1.71
PABPN1-204	ENST00000554062		F8VWA3	439 aa		4.35	□□□□□ -1.71
PABPN1-204	ENST00000554062	NPIPA3	F8WFD2	350 aa		4.35	□□□□□ -1.71
PABPN1-204	ENST00000554062	CTDSPL	O15194	276 aa		4.35	□□□□□ -1.71
PABPN1-204	ENST00000554062	SCO2	O43819	266 aa		4.35	□□□□□ -1.71
PABPN1-204	ENST00000554062	AKAP8	O43823	692 aa	Known RBP	4.35	□□□□□ -1.71
PABPN1-204	ENST00000554062	ATP9A	O75110	1047 aa		4.35	□□□□□ -1.71
PABPN1-204	ENST00000554062	LDB3	O75112	727 aa		4.35	□□□□□ -1.71
PABPN1-204	ENST00000554062	B3GALNT1	O75752	331 aa		4.35	□□□□□ -1.71
PABPN1-204	ENST00000554062	WISP2	O76076	250 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms