RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 CTAGE15A4D2H0 777 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 TK2O00142 265 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 CTAGE8P0CG41 777 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 ZNF37AP17032 561 aaPredicted RBP19.54■□□□□ 0.72
FOXA1-203ENST00000553751 TAS2R39P59534 338 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 ZNF460Q14592 562 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 NAA25Q14CX7 972 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 PTCHD3Q3KNS1 767 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 ICE2Q659A1 982 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 RHBDD2Q6NTF9 364 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 FAM198BQ6UWH4 519 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 MBOAT1Q6ZNC8 495 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 C3orf62Q6ZUJ4 267 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 RNF44Q7L0R7 432 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 CTAGE6Q86UF2 777 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 CTAGE4Q8IX94 777 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 MCOLN3Q8TDD5 553 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 CDKL2Q92772 493 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 CCDC138Q96M89 665 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 DPH7Q9BTV6 452 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 GPR87Q9BY21 358 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 LRRC4CQ9HCJ2 640 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 MRPS30Q9NP92 439 aaKnown RBP19.54■□□□□ 0.72
FOXA1-203ENST00000553751 IRAK4Q9NWZ3 460 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 DMGDHQ9UI17 866 aaKnown RBP19.54■□□□□ 0.72
FOXA1-203ENST00000553751 SRPK3Q9UPE1 567 aa19.54■□□□□ 0.72
FOXA1-203ENST00000553751 SEC16AO15027 2179 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 CREG1O75629 220 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 CAPN1P07384 714 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 SAT1P21673 171 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 PTPN4P29074 926 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 RPS18P62269 152 aaKnown RBP19.53■□□□□ 0.72
FOXA1-203ENST00000553751 TBPL1P62380 186 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 PRDX1Q06830 199 aaKnown RBP19.53■□□□□ 0.72
FOXA1-203ENST00000553751 COL9A2Q14055 689 aaPredicted RBP19.53■□□□□ 0.72
FOXA1-203ENST00000553751 LY6DQ14210 128 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 C16orf46Q6P387 395 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 CEP97Q8IW35 865 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 PDLIM5Q96HC4 596 aaKnown RBP19.53■□□□□ 0.72
FOXA1-203ENST00000553751 CATSPER2Q96P56 530 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 GBP5Q96PP8 586 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 DPH2Q9BQC3 489 aaPredicted RBP19.53■□□□□ 0.72
FOXA1-203ENST00000553751 SELENOSQ9BQE4 189 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 ANKMY1Q9P2S6 941 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 IKZF3Q9UKT9 509 aa19.53■□□□□ 0.72
FOXA1-203ENST00000553751 CCNDBP1O95273 360 aa19.52■□□□□ 0.72
FOXA1-203ENST00000553751 FURINP09958 794 aa19.52■□□□□ 0.72
FOXA1-203ENST00000553751 RAB40ALP0C0E4 278 aa19.52■□□□□ 0.72
FOXA1-203ENST00000553751 RPS15P62841 145 aaKnown RBP19.52■□□□□ 0.72
FOXA1-203ENST00000553751 ILF2Q12905 390 aaKnown RBP19.52■□□□□ 0.72
FOXA1-203ENST00000553751 FRMPD2BQ6IN97 320 aa19.52■□□□□ 0.72
FOXA1-203ENST00000553751 BORAQ6PGQ7 559 aa19.52■□□□□ 0.72
FOXA1-203ENST00000553751 PAQR7Q86WK9 346 aa19.52■□□□□ 0.72
FOXA1-203ENST00000553751 ENDOVQ8N8Q3 282 aaKnown RBP19.52■□□□□ 0.72
FOXA1-203ENST00000553751 PROKR1Q8TCW9 393 aa19.52■□□□□ 0.72
FOXA1-203ENST00000553751 RBBP8Q99708 897 aa19.52■□□□□ 0.72
FOXA1-203ENST00000553751 CPNE1Q99829 537 aa19.52■□□□□ 0.72
FOXA1-203ENST00000553751 PLCD4Q9BRC7 762 aa19.52■□□□□ 0.72
FOXA1-203ENST00000553751 FAM117AQ9C073 453 aa19.52■□□□□ 0.72
FOXA1-203ENST00000553751 CCDC177Q9NQR7 707 aaPredicted RBP19.52■□□□□ 0.72
FOXA1-203ENST00000553751 ABCF3Q9NUQ8 709 aa19.52■□□□□ 0.72
FOXA1-203ENST00000553751 DHCR7Q9UBM7 475 aaKnown RBP19.52■□□□□ 0.72
FOXA1-203ENST00000553751 FARSAQ9Y285 508 aaKnown RBP19.52■□□□□ 0.72
FOXA1-203ENST00000553751 MTO1Q9Y2Z2 717 aaKnown RBP19.52■□□□□ 0.72
FOXA1-203ENST00000553751 TLN1Q9Y490 2541 aaKnown RBP19.51■□□□□ 0.71
FOXA1-203ENST00000553751 A0A0J9YVX5 310 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 RECKO95980 971 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 PRB1P04280 392 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 STX2P32856 288 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 GP5P40197 560 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 ABATP80404 500 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 ERV3-1Q14264 604 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 KBTBD12Q3ZCT8 623 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 TCTE1Q5JU00 501 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 C1orf189Q5VU69 101 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 ZNF425Q6IV72 752 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 AGTRAPQ6RW13 159 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 SBSNQ6UWP8 590 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 EXD3Q8N9H8 876 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 ZFYVE21Q9BQ24 234 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 NDC1Q9BTX1 674 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 NLNQ9BYT8 704 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 SEMA4CQ9C0C4 833 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 SYNPO2LQ9H987 977 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 POPDC3Q9HBV1 291 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 STARD5Q9NSY2 213 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 CUEDC1Q9NWM3 386 aaPredicted RBP19.51■□□□□ 0.71
FOXA1-203ENST00000553751 PCM1Q15154 2024 aa19.51■□□□□ 0.71
FOXA1-203ENST00000553751 LOC105369274A0A096LPK9 316 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 LOC102723532A0A0G2JNH3 316 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 CDC14CA4D256 554 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 FITM1A5D6W6 292 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 SRPX2O60687 465 aaPredicted RBP19.5■□□□□ 0.71
FOXA1-203ENST00000553751 C1QL1O75973 258 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 WISP3O95389 354 aaPredicted RBP19.5■□□□□ 0.71
FOXA1-203ENST00000553751 ENO2P09104 434 aaPredicted RBP19.5■□□□□ 0.71
FOXA1-203ENST00000553751 FAM87AP0C7U9 286 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 AGXTP21549 392 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 AP1S2P56377 157 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 VSX2P58304 361 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms