RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, human

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-219	ENST00000553745	MAP4	P27816	1152 aa	Known RBP	13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	HSPA7	P48741	367 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	AP1S2	P56377	157 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	STX1B	P61266	288 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	MRPS22	P82650	360 aa	Known RBP	13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	CTBS	Q01459	385 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	TRAP1	Q12931	704 aa	Known RBP	13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	TRIM25	Q14258	630 aa	Known RBP	13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	TRIP10	Q15642	601 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	XKR7	Q5GH72	579 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	PMS2CL	Q68D20	193 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	OGFOD2	Q6N063	350 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	TMEM154	Q6P9G4	183 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	LPCAT2	Q7L5N7	544 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	PARG	Q86W56	976 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	FBXL6	Q8N531	539 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	OR5AR1	Q8NGP9	310 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	MCOLN3	Q8TDD5	553 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	GAB3	Q8WWW8	586 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	DNASE2B	Q8WZ79	361 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	ROPN1L	Q96C74	230 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	ASB9	Q96DX5	294 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	HIST1H2AH	Q96KK5	128 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	HIST1H2AJ	Q99878	128 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	GPATCH1	Q9BRR8	931 aa	Known RBP	13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	H2AFJ	Q9BTM1	129 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	TRIM54	Q9BYV2	358 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	SLC52A3	Q9NQ40	469 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	SDR39U1	Q9NRG7	319 aa	Predicted RBP	13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	ADA2	Q9NZK5	511 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	MAP10	Q9P2G4	905 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	KLF15	Q9UIH9	416 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	RIMS3	Q9UJD0	308 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	ACSL5	Q9ULC5	683 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	ASF1A	Q9Y294	204 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	DGKB	Q9Y6T7	804 aa		13.65	□□□□□ -0.22
ABCD4-219	ENST00000553745	DPPA5	A6NC42	116 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	MAGEA13P	A6NCF6	341 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	PDZK1P1	A8MUH7	402 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	IFRD1	O00458	451 aa	Predicted RBP	13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	E2F3	O00716	465 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	GPR37L1	O60883	481 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	UROS	P10746	265 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	IDS	P22304	550 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	ACTR1B	P42025	376 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	ACTR1A	P61163	376 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	SULT1C3	Q6IMI6	304 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	UNC5D	Q6UXZ4	953 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	IQCH	Q86VS3	1027 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	TICAM1	Q8IUC6	712 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	DDIAS	Q8IXT1	998 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	LILRA2	Q8N149	483 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	MIER2	Q8N344	545 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	FAM156A	Q8NDB6	213 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	UBTD2	Q8WUN7	234 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	TFG	Q92734	400 aa	Predicted RBP	13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	HGH1	Q9BTY7	390 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	PRDM8	Q9NQV8	689 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	FBXO4	Q9UKT5	387 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	BTRC	Q9Y297	605 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	TIMM22	Q9Y584	194 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	GPR45	Q9Y5Y3	372 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	TTC28	Q96AY4	2481 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	VPS13A	Q96RL7	3174 aa		13.64	□□□□□ -0.23
ABCD4-219	ENST00000553745	PRORSD1P	A6NEY8	169 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	TNF	P01375	233 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	C8B	P07358	591 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	PIM1	P11309	404 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	HGF	P14210	728 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	ITPKA	P23677	461 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	AQP4	P55087	323 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.63	□□□□□ -0.23	2e-8	■■■□□ 18.3
ABCD4-219	ENST00000553745	LRRC36	Q1X8D7	754 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	WDR45B	Q5MNZ6	344 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	SLC30A9	Q6PML9	568 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	SPATA19	Q7Z5L4	167 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	NRROS	Q86YC3	692 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	PHACTR4	Q8IZ21	702 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	TUBGCP3	Q96CW5	907 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	DUS3L	Q96G46	650 aa	Known RBP	13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	C12orf66	Q96MD2	445 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	ZNF382	Q96SR6	550 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	INSM2	Q96T92	566 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	PKP4	Q99569	1192 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	TBC1D29	Q9UFV1	150 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	NDUFAF1	Q9Y375	327 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	TLR4	O00206	839 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	EML2	O95834	649 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	CELA2B	P08218	269 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	LINGO3	P0C6S8	592 aa		13.63	□□□□□ -0.23
ABCD4-219	ENST00000553745	UQCRB	P14927	111 aa		13.63	□□□□□ -0.23

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