RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ETAA1Q9NY74 926 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 ZNHIT2Q9UHR6 403 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 DLGAP4Q9Y2H0 992 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 ORC6Q9Y5N6 252 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 GMEB1Q9Y692 573 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 V9GYQ6 96 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 RFXANKO14593 260 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 AREL1O15033 823 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 NOL3O60936 208 aaKnown RBP12.54□□□□□ -0.4
SHMT2-205ENST00000553474 PRKD3O94806 890 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 MT-ND1P03886 318 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 RB1P06400 928 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 SPATA31D3P0C874 917 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 TCF3P15923 654 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 MAP4P27816 1152 aaKnown RBP12.54□□□□□ -0.4
SHMT2-205ENST00000553474 PTPN6P29350 595 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 CCR3P51677 355 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 PNLIPRP1P54315 467 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 TMBIM6P55061 237 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 AAK1Q2M2I8 961 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 LDLRAP1Q5SW96 308 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 ENPP6Q6UWR7 440 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 EP400NLQ6ZTU2 488 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 SPATA31D4Q6ZUB0 917 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 OFCC1Q8IZS5 231 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 TTC16Q8NEE8 873 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 OR8J2Q8NGG1 315 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 OR2A12Q8NGT7 310 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 SPPL3Q8TCT6 385 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 IRF7Q92985 503 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 GLMNQ92990 594 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 C12orf43Q96C57 262 aaKnown RBP12.54□□□□□ -0.4
SHMT2-205ENST00000553474 P2RY13Q9BPV8 354 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 IKZF5Q9H5V7 419 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 ZNF576Q9H609 170 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 FAM118AQ9NWS6 357 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 DKK3Q9UBP4 350 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 TMPRSS11EQ9UL52 423 aa12.54□□□□□ -0.4
SHMT2-205ENST00000553474 RUVBL1Q9Y265 456 aaKnown RBP12.54□□□□□ -0.4
SHMT2-205ENST00000553474 MYOFQ9NZM1 2061 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 H0Y858 1186 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 H0YIV9 168 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 SLC16A6O15403 523 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 ABCB7O75027 752 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 PSIP1O75475 530 aaKnown RBP12.53□□□□□ -0.4
SHMT2-205ENST00000553474 CLIC3O95833 236 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 PPIBP23284 216 aaKnown RBP12.53□□□□□ -0.4
SHMT2-205ENST00000553474 SOX11P35716 441 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 ASMTP46597 345 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 ARHGDIAP52565 204 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 ERVFC1P60507 584 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 HPCAP84074 193 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 RAB39AQ14964 217 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 SKIV2LQ15477 1246 aaKnown RBP12.53□□□□□ -0.4
SHMT2-205ENST00000553474 DUOXA1Q1HG43 343 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 HENMT1Q5T8I9 393 aaKnown RBP12.53□□□□□ -0.4
SHMT2-205ENST00000553474 NOXRED1Q6NXP6 359 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 NEK5Q6P3R8 708 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 KCTD8Q6ZWB6 473 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 CYP2U1Q7Z449 544 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 GAB3Q8WWW8 586 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 ELMO1Q92556 727 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 NCLNQ969V3 563 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 CCDC138Q96M89 665 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 CORO1BQ9BR76 489 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 BBS2Q9BXC9 721 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 TOR3AQ9H497 397 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 POLR1BQ9H9Y6 1135 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 MARK1Q9P0L2 795 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 VPS29Q9UBQ0 182 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 RPS6KA6Q9UK32 745 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 CORO2BQ9UQ03 480 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 SLC22A14Q9Y267 594 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 HSPE1-MOB4S4R3N1 261 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 TRANK1O15050 2925 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 UPK3BL1B0FP48 263 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 UPK3BL2E5RIL1 263 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 MYO1DO94832 1006 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 PCNAP12004 261 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 GPX2P18283 190 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 CRHBPP24387 322 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 RYKP34925 604 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 IRS1P35568 1242 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 PFN3P60673 137 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 PHC1P78364 1004 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 PLIN5Q00G26 463 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 IRF8Q02556 426 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 CHIT1Q13231 466 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 PMS2P3Q13401 168 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 ZXDCQ2QGD7 858 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-205ENST00000553474 ZNF284Q2VY69 593 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 LRRC23Q53EV4 343 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-205ENST00000553474 Q6ZVU0 165 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 TMEM25Q86YD3 366 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 KIAA1958Q8N8K9 716 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 OR13F1Q8NGS4 319 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 MTFMTQ96DP5 389 aaKnown RBP12.53□□□□□ -0.4
SHMT2-205ENST00000553474 GABARAPL1Q9H0R8 117 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 EPHX3Q9H6B9 360 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 SPHK2Q9NRA0 654 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms