RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CCL24O00175 119 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 BMPR1BO00238 502 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 P2RY10O00398 339 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 FLRT2O43155 660 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 BAG3O95817 575 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 EEF2P13639 858 aaKnown RBP4.7□□□□□ -1.66
SYNE2-210ENST00000553455 CDX1P47902 265 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-210ENST00000553455 KLC1Q07866 573 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 HERC3Q15034 1050 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 NONOQ15233 471 aaKnown RBP eCLIP4.7□□□□□ -1.66
SYNE2-210ENST00000553455 RBBP5Q15291 538 aaKnown RBP4.7□□□□□ -1.66
SYNE2-210ENST00000553455 OR4A47Q6IF82 309 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 NDUFAF2Q8N183 169 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 SEPT1Q8WYJ6 367 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 CTAGE1Q96RT6 745 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 MAP3K3Q99759 626 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 OR2B2Q9GZK3 357 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 ZMYND12Q9H0C1 365 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 SHARPINQ9H0F6 387 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 MMP28Q9H239 520 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 BICC1Q9H694 974 aaKnown RBP4.7□□□□□ -1.66
SYNE2-210ENST00000553455 FAM207AQ9NSI2 230 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-210ENST00000553455 FAM118AQ9NWS6 357 aa4.7□□□□□ -1.66
SYNE2-210ENST00000553455 O00370 1275 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 DDHD2O94830 711 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 SERPING1P05155 500 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 TGFB3P10600 412 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 GP1BBP13224 206 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 MYL6BP14649 208 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 CA6P23280 308 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 RPL36AP83881 106 aaKnown RBP4.69□□□□□ -1.66
SYNE2-210ENST00000553455 GCNT1Q02742 428 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 C17orf67Q0P5P2 114 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 GPR17Q13304 367 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 P2RY6Q15077 328 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 LYSMD4Q5XG99 296 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 FAM166AQ6J272 317 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 ZNF449Q6P9G9 518 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 IYDQ6PHW0 289 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 PRSS55Q6UWB4 352 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-210ENST00000553455 RBMS3Q6XE24 437 aaKnown RBP4.69□□□□□ -1.66
SYNE2-210ENST00000553455 TRPT1Q86TN4 253 aaKnown RBP4.69□□□□□ -1.66
SYNE2-210ENST00000553455 PYCR2Q96C36 320 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 NSL1Q96IY1 281 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 UTP14AQ9BVJ6 771 aaKnown RBP4.69□□□□□ -1.66
SYNE2-210ENST00000553455 SNX25Q9H3E2 840 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 MMADHCQ9H3L0 296 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-210ENST00000553455 TMEM206Q9H813 350 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 PHPT1Q9NRX4 125 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-210ENST00000553455 P4HTMQ9NXG6 502 aa4.69□□□□□ -1.66
SYNE2-210ENST00000553455 LEF1Q9UJU2 399 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-210ENST00000553455 WDR81Q562E7 1941 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 FAM172BPA6NC97 362 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 F8VVB4 439 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 F8VWA3 439 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 FGF17O60258 216 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 CIDEAO60543 219 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 GOSR1O95249 250 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 ANKRD34CP0C6C1 535 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 EPORP19235 508 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 KRTAP1-1Q07627 177 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 SLC25A53Q5H9E4 307 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 CREBRFQ8IUR6 639 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 TUSC5Q8IXB3 177 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 TMCO5AQ8N6Q1 288 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 KLHDC1Q8N7A1 406 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 STPG4Q8N801 248 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 OR7G3Q8NG95 312 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 TM9SF4Q92544 642 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 TEKT1Q969V4 418 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 ACTL8Q9H568 366 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 ZNF334Q9HCZ1 680 aaPredicted RBP4.68□□□□□ -1.66
SYNE2-210ENST00000553455 SIX2Q9NPC8 291 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 ECHDC1Q9NTX5 307 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 ABCB8Q9NUT2 735 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 ADPRHL2Q9NX46 363 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 CNIH4Q9P003 139 aa4.68□□□□□ -1.66
SYNE2-210ENST00000553455 IGHV4-61A0A0C4DH41 118 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 C17orf105B2RV13 164 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 C2CD4DB7Z1M9 353 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 NME6O75414 186 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-210ENST00000553455 IGHV4-59P01825 116 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 APOHP02749 345 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-210ENST00000553455 STAG3L1P0CL83 205 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 DARSP14868 501 aaKnown RBP4.67□□□□□ -1.66
SYNE2-210ENST00000553455 CEACAM8P31997 349 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-210ENST00000553455 CSTF2P33240 577 aaKnown RBP eCLIP4.67□□□□□ -1.66
SYNE2-210ENST00000553455 SOAT1P35610 550 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 LINC01547P58512 204 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-210ENST00000553455 ASIC1P78348 528 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 FOLH1Q04609 750 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 SQLEQ14534 574 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 TAF13Q15543 124 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 GLRA4Q5JXX5 417 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 SLC35D3Q5M8T2 416 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 SPOUT1Q5T280 376 aaKnown RBP4.67□□□□□ -1.66
SYNE2-210ENST00000553455 MARK2Q7KZI7 788 aaKnown RBP4.67□□□□□ -1.66
SYNE2-210ENST00000553455 CCDC91Q7Z6B0 441 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 PIGZQ86VD9 579 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms