RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 STMN1P16949 149 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 WT1P19544 449 aaPredicted RBP17.72■□□□□ 0.43
CPSF2-202ENST00000553427 RAB10P61026 200 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 CDKL1Q00532 357 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 EFTUD2Q15029 972 aaKnown RBP eCLIP17.72■□□□□ 0.43
CPSF2-202ENST00000553427 DEFB110Q30KQ9 67 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 ZNF425Q6IV72 752 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 AGTRAPQ6RW13 159 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 MCATQ8IVS2 390 aaKnown RBP17.72■□□□□ 0.43
CPSF2-202ENST00000553427 LRRN4CLQ8ND94 238 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 ANKRD49Q8WVL7 239 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 ATL1Q8WXF7 558 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 FBXL8Q96CD0 374 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 DPH2Q9BQC3 489 aaPredicted RBP17.72■□□□□ 0.43
CPSF2-202ENST00000553427 SGPP1Q9BX95 441 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 ACTR5Q9H9F9 607 aaPredicted RBP17.72■□□□□ 0.43
CPSF2-202ENST00000553427 SLC6A20Q9NP91 592 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 MRPS30Q9NP92 439 aaKnown RBP17.72■□□□□ 0.43
CPSF2-202ENST00000553427 UTP6Q9NYH9 597 aaKnown RBP17.72■□□□□ 0.43
CPSF2-202ENST00000553427 TAC3Q9UHF0 121 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 NFU1Q9UMS0 254 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 SRPK3Q9UPE1 567 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 KLHL20Q9Y2M5 609 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 PCDHGA6Q9Y5G7 932 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 LOC400499M0QZD8 3231 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 IGSF10Q6WRI0 2623 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 IGKV1-8A0A0C4DH67 115 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 ZSCAN9O15535 394 aaPredicted RBP17.71■□□□□ 0.43
CPSF2-202ENST00000553427 CTSVO60911 334 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 RHOXF2BP0C7M4 288 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 HRH2P25021 359 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 GCGRP47871 477 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 TBPL1P62380 186 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 GPS2Q13227 327 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 CRTC2Q53ET0 693 aaPredicted RBP17.71■□□□□ 0.43
CPSF2-202ENST00000553427 TCTE1Q5JU00 501 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 CCDC91Q7Z6B0 441 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 DSELQ8IZU8 1212 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 ZSCAN1Q8NBB4 408 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 SLC38A9Q8NBW4 561 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 PPFIBP2Q8ND30 876 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 UBXN10Q96LJ8 280 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 RHOXF2Q9BQY4 288 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 PLCD4Q9BRC7 762 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 DPH7Q9BTV6 452 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 ACAT2Q9BWD1 397 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 CAB39LQ9H9S4 337 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 PCMTD2Q9NV79 361 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 ARL15Q9NXU5 204 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 CROTQ9UKG9 612 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 IKZF3Q9UKT9 509 aa17.71■□□□□ 0.43
CPSF2-202ENST00000553427 FITM1A5D6W6 292 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 MEN1O00255 615 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 ZNF749O43361 778 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 SRPX2O60687 465 aaPredicted RBP17.7■□□□□ 0.42
CPSF2-202ENST00000553427 FAM155BO75949 473 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 ACSL3O95573 720 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 ABHD2P08910 425 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 CRABP2P29373 138 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 SLC26A3P40879 764 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 ATP6V0D1P61421 351 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 UBAP2Q5T6F2 1119 aaKnown RBP17.7■□□□□ 0.42
CPSF2-202ENST00000553427 ARHGAP40Q5TG30 622 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 PRAMEF17Q5VTA0 474 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 YOD1Q5VVQ6 348 aaPredicted RBP17.7■□□□□ 0.42
CPSF2-202ENST00000553427 PRAMEF13Q5VWM6 474 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 ZNF385CQ66K41 422 aaPredicted RBP17.7■□□□□ 0.42
CPSF2-202ENST00000553427 RHBDD2Q6NTF9 364 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 MBOAT1Q6ZNC8 495 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 PAQR7Q86WK9 346 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 OR56A3Q8NH54 315 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 PROKR1Q8TCW9 393 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 KCND3Q9UK17 655 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 SNX7Q9UNH6 387 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 OARD1Q9Y530 152 aa17.7■□□□□ 0.42
CPSF2-202ENST00000553427 NPEPPSL1A6NEC2 478 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 ZNF891A8MT65 544 aaPredicted RBP17.69■□□□□ 0.42
CPSF2-202ENST00000553427 CDC7O00311 574 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 PHGDHO43175 533 aaKnown RBP17.69■□□□□ 0.42
CPSF2-202ENST00000553427 RECKO95980 971 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 KLK3P07288 261 aaPredicted RBP17.69■□□□□ 0.42
CPSF2-202ENST00000553427 EZRP15311 586 aaKnown RBP17.69■□□□□ 0.42
CPSF2-202ENST00000553427 DLSTP36957 453 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 CSRP3P50461 194 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 YBX1P67809 324 aaKnown RBP17.69■□□□□ 0.42
CPSF2-202ENST00000553427 MC1RQ01726 317 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 RHDQ02161 417 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 DNASE1L3Q13609 305 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 TSTA3Q13630 321 aaPredicted RBP17.69■□□□□ 0.42
CPSF2-202ENST00000553427 THEMIS2Q5TEJ8 643 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 LCTLQ6UWM7 567 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 TRMT10CQ7L0Y3 403 aaKnown RBP17.69■□□□□ 0.42
CPSF2-202ENST00000553427 CT55Q8WUE5 264 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 SLC44A1Q8WWI5 657 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 CLIP3Q96DZ5 547 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 ZFYVE21Q9BQ24 234 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 SELENOSQ9BQE4 189 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 HAUS8Q9BT25 410 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 GPR87Q9BY21 358 aa17.69■□□□□ 0.42
CPSF2-202ENST00000553427 SPRTNQ9H040 489 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms