RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 C1QTNF9P0C862 333 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 TPBGLP0DKB5 382 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 CCL4P13236 92 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 ST6GAL1P15907 406 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 IMPA1P29218 277 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 EIF2S3P41091 472 aaKnown RBP9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 ABCG1P45844 678 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 CCR8P51685 355 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 TIAL1Q01085 375 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 TSTA3Q13630 321 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 CSHL1Q14406 222 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 SLC29A2Q14542 456 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 TGFBIQ15582 683 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 ST3GAL2Q16842 350 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 CRTC2Q53ET0 693 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 C10orf62Q5T681 223 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 PRMT9Q6P2P2 845 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 LINC01555Q8NAE3 123 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 OR2A1Q8NGT9 310 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 MDM1Q8TC05 714 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 UBE2E3Q969T4 207 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 ISL2Q96A47 359 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 NACC2Q96BF6 587 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 ZNF501Q96CX3 271 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 MVB12AQ96EY5 273 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 MED8Q96G25 268 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 CCNL2Q96S94 520 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 SLC30A3Q99726 388 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 ZFYVE21Q9BQ24 234 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 SELENOSQ9BQE4 189 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 PLCD4Q9BRC7 762 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 DHRS4Q9BTZ2 278 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 SGPP1Q9BX95 441 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 TMEM121BQ9BXQ6 578 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 SMYD2Q9NRG4 433 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 OCIAD1Q9NX40 245 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 NUDT4Q9NZJ9 180 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 STOX2Q9P2F5 926 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 MID2Q9UJV3 735 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 B3GALT1Q9Y5Z6 326 aa9.88□□□□□ -0.83
TRAFD1-208ENST00000552890 PCM1Q15154 2024 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 KCNE1BA0A087WTH5 132 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 OR2A25A4D2G3 310 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 C9orf172C9J069 976 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 PCDH17O14917 1159 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 CLGNO14967 610 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 ZSCAN9O15535 394 aaPredicted RBP9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 KIF1CO43896 1103 aaKnown RBP9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 KLHL41O60662 606 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 SCRG1O75711 98 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 C1QAP02745 245 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 CAPNS1P04632 268 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 C2P06681 752 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 SLC35E2BP0CK96 405 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 ITIH1P19827 911 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 TAC1P20366 129 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 MAGP20916 626 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 SERPINB1P30740 379 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 GGT5P36269 586 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 GRIA3P42263 894 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 CCT5P48643 541 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 RPS15P62841 145 aaKnown RBP9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 NAE1Q13564 534 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 LAPTM5Q13571 262 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 TSNQ15631 228 aaKnown RBP9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 HIST2H2ACQ16777 129 aaPredicted RBP9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 MUM1Q2TAK8 710 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 PAGE2BQ5JRK9 111 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 HIST2H2AA3Q6FI13 130 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 SBSNQ6UWP8 590 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 ADCK2Q7Z695 626 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 DTX1Q86Y01 620 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 MCATQ8IVS2 390 aaKnown RBP9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 CEP97Q8IW35 865 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 CACNA2D3Q8IZS8 1091 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 KRT78Q8N1N4 520 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 DNAJC22Q8N4W6 341 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 C7orf57Q8NEG2 295 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 OR56A3Q8NH54 315 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 SREK1Q8WXA9 508 aaKnown RBP9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 JPH3Q8WXH2 748 aaPredicted RBP9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 CAVIN3Q969G5 261 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 CCDC126Q96EE4 140 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 CATSPER2Q96P56 530 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 IP6K3Q96PC2 410 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 MRPL57Q9BQC6 102 aaKnown RBP9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 AIF1LQ9BQI0 150 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 DPH7Q9BTV6 452 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 TXLNGYQ9BZA5 131 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 STMN4Q9H169 189 aaPredicted RBP9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 EHD1Q9H4M9 534 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 ACTR5Q9H9F9 607 aaPredicted RBP9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 CLK4Q9HAZ1 481 aaKnown RBP9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 SNX15Q9NRS6 342 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 SPHK1Q9NYA1 384 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 EURLQ9NYK6 297 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 WWOXQ9NZC7 414 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 CD274Q9NZQ7 290 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 SENP1Q9P0U3 644 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms