RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 UBAP2LQ14157 1087 aaKnown RBP15.62■□□□□ 0.09
VPS29-207ENST00000549970 NKG7Q16617 165 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 FAM214AQ32MH5 1076 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 RNASEH2BQ5TBB1 312 aaKnown RBP15.62■□□□□ 0.09
VPS29-207ENST00000549970 VWA5B1Q5TIE3 1220 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 JMJD6Q6NYC1 403 aaPredicted RBP15.62■□□□□ 0.09
VPS29-207ENST00000549970 SHISA6Q6ZSJ9 500 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 NEK10Q6ZWH5 1172 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 RNF44Q7L0R7 432 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 OR4N4Q8N0Y3 316 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 GALNT16Q8N428 558 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 RBMXL3Q8N7X1 1067 aaKnown RBP15.62■□□□□ 0.09
VPS29-207ENST00000549970 PPFIBP2Q8ND30 876 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 SMPDL3AQ92484 453 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 KCNJ9Q92806 393 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 SPSB2Q99619 263 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 GPR21Q99679 349 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 SOX17Q9H6I2 414 aaPredicted RBP15.62■□□□□ 0.09
VPS29-207ENST00000549970 MRPS30Q9NP92 439 aaKnown RBP15.62■□□□□ 0.09
VPS29-207ENST00000549970 IARS2Q9NSE4 1012 aaKnown RBP15.62■□□□□ 0.09
VPS29-207ENST00000549970 ABCF3Q9NUQ8 709 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 STOX2Q9P2F5 926 aaPredicted RBP15.62■□□□□ 0.09
VPS29-207ENST00000549970 CTSFQ9UBX1 484 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 ASIC3Q9UHC3 531 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 CDC23Q9UJX2 597 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 FBXO5Q9UKT4 447 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 MED16Q9Y2X0 877 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 PTPN13Q12923 2485 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 HYKKA2RU49 373 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 OR2A25A4D2G3 310 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 VPS4BO75351 444 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 ONECUT2O95948 504 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 ALBP02768 609 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 ERVK-10P10266 1014 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 PNLIPRP1P54315 467 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 ARHGAP19Q14CB8 494 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 NAA25Q14CX7 972 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 HSP90AA5PQ58FG0 334 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 SLC6A19Q695T7 634 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 KCNMB4Q86W47 210 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 HPS6Q86YV9 775 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 LMNTD2Q8IXW0 634 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.61■□□□□ 0.09
VPS29-207ENST00000549970 CALML6Q8TD86 181 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 ZFYVE21Q9BQ24 234 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 DDX47Q9H0S4 455 aaKnown RBP15.61■□□□□ 0.09
VPS29-207ENST00000549970 KCNF1Q9H3M0 494 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 WDR54Q9H977 334 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 SLAMF7Q9NQ25 335 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 ENAMQ9NRM1 1142 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 TAC3Q9UHF0 121 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 VPS4AQ9UN37 437 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 HEATR5BQ9P2D3 2071 aa15.61■□□□□ 0.09
VPS29-207ENST00000549970 ZNF839A8K0R7 811 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 H0YGG7 62 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 AGPSO00116 658 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 CES2O00748 559 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 ALOX12BO75342 701 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 BANF1O75531 89 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 HAUS5O94927 633 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 SLC16A8O95907 504 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 MPC1LP0DKB6 136 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 PGAM1P18669 254 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 MMP11P24347 488 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 UQCRFS1P47985 274 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 ARF3P61204 181 aaPredicted RBP15.6■□□□□ 0.09
VPS29-207ENST00000549970 MYBPC3Q14896 1274 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 PRR30Q53SZ7 412 aaPredicted RBP15.6■□□□□ 0.09
VPS29-207ENST00000549970 ICE2Q659A1 982 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 FBXO42Q6P3S6 717 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 PIWIL4Q7Z3Z4 852 aaKnown RBP15.6■□□□□ 0.09
VPS29-207ENST00000549970 CPNE9Q8IYJ1 553 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 Q8NA96 180 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 CD200R1Q8TD46 325 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 ZNF480Q8WV37 535 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 INPP5DQ92835 1189 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 COL26A1Q96A83 441 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 PLCD4Q9BRC7 762 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 FAM167BQ9BTA0 163 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 SLC26A1Q9H2B4 701 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 ATP13A2Q9NQ11 1180 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 C5AR2Q9P296 337 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 MAP10Q9P2G4 905 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 KLHL42Q9P2K6 505 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 FBXL4Q9UKA2 621 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 DHRS7Q9Y394 339 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 COMMD10Q9Y6G5 202 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 NUP210LQ5VU65 1888 aa15.6■□□□□ 0.09
VPS29-207ENST00000549970 RP1L1Q8IWN7 2480 aaPredicted RBP15.6■□□□□ 0.09
VPS29-207ENST00000549970 IGKV1-8A0A0C4DH67 115 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 E7ENX8 843 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 SMAPO00193 183 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 DNALI1O14645 258 aaPredicted RBP15.59■□□□□ 0.09
VPS29-207ENST00000549970 ZBTB14O43829 449 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 VPS26AO75436 327 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 CCNDBP1O95273 360 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 ALPPP05187 535 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 ENO3P13929 434 aaPredicted RBP15.59■□□□□ 0.09
VPS29-207ENST00000549970 GNLYP22749 145 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 ITGA3P26006 1051 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms