RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 APRTP07741 180 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 STSP08842 583 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 ZGLP1P0C6A0 271 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 GRIA1P42261 906 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 Q0VFX4 171 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 ZRSR2Q15696 482 aaKnown RBP12.27□□□□□ -0.45
PTCH1-218ENST00000548945 INAQ16352 499 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 MUM1Q2TAK8 710 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 PCID2Q5JVF3 399 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 C1QL3Q5VWW1 255 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 ATG9BQ674R7 924 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 SHISA6Q6ZSJ9 500 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 OTOAQ7RTW8 1153 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 KRT222Q8N1A0 295 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 BCORP1Q8N888 145 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 OR2A1Q8NGT9 310 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 MIEF2Q96C03 454 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 MVB12AQ96EY5 273 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 CNDP1Q96KN2 507 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 EIF2B3Q9NR50 452 aaKnown RBP12.27□□□□□ -0.45
PTCH1-218ENST00000548945 RAB6BQ9NRW1 208 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 SPATA7Q9P0W8 599 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 PAK5Q9P286 719 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 MARCH4Q9P2E8 410 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-218ENST00000548945 CIDEBQ9UHD4 219 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 TTC7AQ9ULT0 858 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-218ENST00000548945 ZNF148Q9UQR1 794 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 ENTPD4Q9Y227 616 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 ANKRD17O75179 2603 aaKnown RBP12.27□□□□□ -0.45
PTCH1-218ENST00000548945 PDZD2O15018 2839 aa12.27□□□□□ -0.45
PTCH1-218ENST00000548945 CELSR1Q9NYQ6 3014 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 OR2A25A4D2G3 310 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 AP3B1O00203 1094 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 PRPF4O43172 522 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTCH1-218ENST00000548945 HNRNPRO43390 633 aaKnown RBP12.26□□□□□ -0.45
PTCH1-218ENST00000548945 ATP5DP30049 168 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 PRTGQ2VWP7 1150 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 SEL1L2Q5TEA6 688 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 ZNF324BQ6AW86 544 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-218ENST00000548945 FRMPD2BQ6IN97 320 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 C4orf22Q6V702 233 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 NDUFAF7Q7L592 441 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 LDB1Q86U70 411 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-218ENST00000548945 KBTBD2Q8IY47 623 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 RNF10Q8N5U6 811 aaKnown RBP12.26□□□□□ -0.45
PTCH1-218ENST00000548945 SKA2Q8WVK7 121 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-218ENST00000548945 MIPEPQ99797 713 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 ZFYVE21Q9BQ24 234 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 IL22Q9GZX6 179 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 CHRAC1Q9NRG0 131 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 TREX1Q9NSU2 369 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 OLAHQ9NV23 265 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 C14orf105Q9NVL8 296 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 ZC3H7BQ9UGR2 993 aaKnown RBP12.26□□□□□ -0.45
PTCH1-218ENST00000548945 C3orf18Q9UK00 162 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 CDC14AQ9UNH5 594 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 NFS1Q9Y697 457 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 MAU2Q9Y6X3 613 aa12.26□□□□□ -0.45
PTCH1-218ENST00000548945 LOC105369274A0A096LPK9 316 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 NSG1A0A0A6YYJ2 146 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 TRAV17A0A0B4J275 112 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 LOC102723532A0A0G2JNH3 316 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 A0A1W2PPV9 198 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 DYTNA2CJ06 578 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 H3BMM5 538 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 NDUFS3O75489 264 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 KLHL18O94889 574 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 MED26O95402 600 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 MATN4O95460 622 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 SERPINA7P05543 415 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 PRR35P0CG20 571 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 ERVK-10P10266 1014 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 ERGP11308 486 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 FBLP22087 321 aaKnown RBP12.25□□□□□ -0.45
PTCH1-218ENST00000548945 PSMB5P28074 263 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 TNFRSF8P28908 595 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 CMPK1P30085 196 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 SOX11P35716 441 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 BDKRB1P46663 353 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 TNFSF10P50591 281 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 ADARP55265 1226 aaKnown RBP12.25□□□□□ -0.45
PTCH1-218ENST00000548945 AP2B1P63010 937 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 DSG2Q14126 1118 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 GBX1Q14549 363 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 ARHGAP19Q14CB8 494 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 LINC00696Q6ZRV3 163 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 RIPOR1Q6ZS17 1223 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 SLC13A5Q86YT5 568 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-218ENST00000548945 OR4N4Q8N0Y3 316 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 METTL27Q8N6F8 245 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-218ENST00000548945 CCDC89Q8N998 374 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 HAS2Q92819 552 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 RELTQ969Z4 430 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 C10orf90Q96M02 699 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 BAG1Q99933 345 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-218ENST00000548945 ZNF160Q9HCG1 818 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 FBN2P35556 2912 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 CCDC168Q8NDH2 2452 aa12.25□□□□□ -0.45
PTCH1-218ENST00000548945 A0A0J9YVX5 310 aa12.24□□□□□ -0.45
PTCH1-218ENST00000548945 IDSB3KWA1 339 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms