RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CYP2A7P20853 494 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 CTSCP53634 463 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 ZXDCQ2QGD7 858 aaPredicted RBP13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 TTC23Q5W5X9 447 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 NOXRED1Q6NXP6 359 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 HSD11B1LQ7Z5J1 315 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 PACRGLQ8N7B6 248 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 PDPRQ8NCN5 879 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 ASPSCR1Q9BZE9 553 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 DNAJC11Q9NVH1 559 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 C3orf18Q9UK00 162 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 TMCO1Q9UM00 188 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 MAP4K5Q9Y4K4 846 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 CHD5Q8TDI0 1954 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 CFAP99D6REC4 459 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 ANKRD28O15084 1053 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 KPNA5O15131 536 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 KLK8O60259 260 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 FZD6O60353 706 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 FAM20BO75063 409 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 EBLN1P0CF75 366 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 METAP1P53582 386 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 GRIN2CQ14957 1233 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 TEAD2Q15562 447 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 MPPE1Q53F39 396 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 ASTLQ6HA08 431 aaPredicted RBP13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 PTRH1Q86Y79 214 aaKnown RBP13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 CFAP206Q8IYR0 622 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 DDHD1Q8NEL9 900 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 OTUB1Q96FW1 271 aaPredicted RBP13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 KCNC2Q96PR1 638 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 SH3GL1Q99961 368 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 OR51B5Q9H339 312 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 CWH43Q9H720 699 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 TIMMDC1Q9NPL8 285 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 ASAH2Q9NR71 780 aa13.27□□□□□ -0.28
PRPF40B-209ENST00000548825 MAGEB17A8MXT2 336 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 PRSS23O95084 383 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 SLC16A8O95907 504 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 VIPP01282 170 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 ANXA4P09525 319 aaPredicted RBP13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 ATP1B2P14415 290 aaPredicted RBP13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 NNMTP40261 264 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 PLA2G16P53816 162 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 TUBA4AP68366 448 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 CARD16Q5EG05 197 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 C6orf141Q5SZD1 244 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 TMEM236Q5W0B7 351 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 BPIFB1Q8TDL5 484 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 ACDQ96AP0 544 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 NODALQ96S42 347 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 MIR1-1HGQ9H1L0 117 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 ELAC1Q9H777 363 aaKnown RBP13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 POLE4Q9NR33 117 aa13.27□□□□□ -0.29
PRPF40B-209ENST00000548825 WDR87Q6ZQQ6 2873 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 LOC100506127A0A0U1RQW1 187 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 ANTXRLA6NF34 631 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 TULP3O75386 442 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 TYRP14679 529 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 FUT4P22083 530 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 MC1RQ01726 317 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 GANABQ14697 944 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 ADCK2Q7Z695 626 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 RAVER1Q8IY67 606 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 IL17FQ96PD4 163 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 CD320Q9NPF0 282 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 BTBD3Q9Y2F9 522 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 UPK1AO00322 258 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 PRAMEF4O60810 478 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 CCR2P41597 374 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 ZNF284Q2VY69 593 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 PAGE2BQ5JRK9 111 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 PRAMEF9Q5VWM5 478 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 TMEM220Q6QAJ8 160 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 BTLAQ7Z6A9 289 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 SLC15A4Q8N697 577 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 ALG14Q96F25 216 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 FUNDC2Q9BWH2 189 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 SORBS1Q9BX66 1292 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 KAT8Q9H7Z6 458 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 C5AR2Q9P296 337 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 RIMKLBQ9ULI2 386 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 OR51B4Q9Y5P0 310 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 MYO15AQ9UKN7 3530 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 SCN4AP35499 1836 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 CHRM5P08912 532 aaPredicted RBP13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 WASP42768 502 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 PRIM2P49643 509 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 BMXP51813 675 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 PIK3C3Q8NEB9 887 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 RORBQ92753 470 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 SCRN2Q96FV2 425 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 RBM4BQ9BQ04 359 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 TMEM175Q9BSA9 504 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 RBM4Q9BWF3 364 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 PLGRKTQ9HBL7 147 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 TRIM39Q9HCM9 518 aa13.26□□□□□ -0.29
PRPF40B-209ENST00000548825 SCHIP1Q9P0W5 487 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms