RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 VSX2P58304 361 aaPredicted RBP11.89□□□□□ -0.51
GCN1-204ENST00000548132 Q0VFX4 171 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 CTBP1Q13363 440 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 DHX34Q14147 1143 aaKnown RBP11.89□□□□□ -0.51
GCN1-204ENST00000548132 SSPNQ14714 243 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 MYBPC3Q14896 1274 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 SF1Q15637 639 aaKnown RBP11.89□□□□□ -0.51
GCN1-204ENST00000548132 MSS51Q4VC12 460 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 CRB2Q5IJ48 1285 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 SUSD1Q6UWL2 747 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 SHISA6Q6ZSJ9 500 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 PIWIL4Q7Z3Z4 852 aaKnown RBP11.89□□□□□ -0.51
GCN1-204ENST00000548132 GALNT16Q8N428 558 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 FBXO15Q8NCQ5 510 aaPredicted RBP11.89□□□□□ -0.51
GCN1-204ENST00000548132 GALNT11Q8NCW6 608 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 PPFIBP2Q8ND30 876 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 ZNF480Q8WV37 535 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 SKA2Q8WVK7 121 aaPredicted RBP11.89□□□□□ -0.51
GCN1-204ENST00000548132 DLG3Q92796 817 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 KCNJ9Q92806 393 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 MAGOHBQ96A72 148 aaKnown RBP11.89□□□□□ -0.51
GCN1-204ENST00000548132 PNPLA2Q96AD5 504 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 SLC22A18Q96BI1 424 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 PKP4Q99569 1192 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 ACAT2Q9BWD1 397 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 XAB2Q9HCS7 855 aaKnown RBP11.89□□□□□ -0.51
GCN1-204ENST00000548132 HOMER3Q9NSC5 361 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 CUEDC1Q9NWM3 386 aaPredicted RBP11.89□□□□□ -0.51
GCN1-204ENST00000548132 IRAK4Q9NWZ3 460 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 JRKLQ9Y4A0 524 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 LRBAP50851 2863 aa11.89□□□□□ -0.51
GCN1-204ENST00000548132 IGLV3-12A0A075B6K2 115 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 A0A0J9YVX5 310 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 USP27XA6NNY8 438 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 E7ENX8 843 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 AGPSO00116 658 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 KPNA5O15131 536 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 DPM1O60762 260 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 SLC16A8O95907 504 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 MMP11P24347 488 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 GABRB3P28472 473 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 IMPA1P29218 277 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 SKIV2L2P42285 1042 aaKnown RBP11.88□□□□□ -0.51
GCN1-204ENST00000548132 FNTAP49354 379 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 TAP2Q03519 686 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 GRM7Q14831 915 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 CRYMQ14894 314 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 INPP5JQ15735 1006 aaPredicted RBP11.88□□□□□ -0.51
GCN1-204ENST00000548132 HKDC1Q2TB90 917 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 TCTE1Q5JU00 501 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 YOD1Q5VVQ6 348 aaPredicted RBP11.88□□□□□ -0.51
GCN1-204ENST00000548132 CASC4Q6P4E1 433 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 KIRREL2Q6UWL6 708 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 IGFL3Q6UXB1 125 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 NEK10Q6ZWH5 1172 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 OVCH1Q7RTY7 1134 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 CPNE9Q8IYJ1 553 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 FAM26EQ8N5C1 309 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 AMER2Q8N7J2 671 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 AMER3Q8N944 861 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 OR9A1PQ8NGU1 263 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 C19orf60Q96EN9 201 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 PBKQ96KB5 322 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 IP6K3Q96PC2 410 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 PSMG3-AS1Q96PY0 264 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 GPR21Q99679 349 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 ZFYVE21Q9BQ24 234 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 DPH7Q9BTV6 452 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 SOX17Q9H6I2 414 aaPredicted RBP11.88□□□□□ -0.51
GCN1-204ENST00000548132 INTS7Q9NVH2 962 aaKnown RBP11.88□□□□□ -0.51
GCN1-204ENST00000548132 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.88□□□□□ -0.51
GCN1-204ENST00000548132 TAC3Q9UHF0 121 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 MRPS2Q9Y399 296 aaKnown RBP11.88□□□□□ -0.51
GCN1-204ENST00000548132 MAU2Q9Y6X3 613 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 FAM169AQ9Y6X4 670 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 CELSR2Q9HCU4 2923 aa11.88□□□□□ -0.51
GCN1-204ENST00000548132 SCN2AQ99250 2005 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 SCN3AQ9NY46 2000 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 SVILO95425 2214 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 A0A1W2PQ72 361 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 TTLL8A6PVC2 850 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 H0YGG7 62 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 GFYI3L273 518 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 FFAR3O14843 346 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 HAT1O14929 419 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 TP73O15350 636 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 GPR42O15529 346 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 ALBP02768 609 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 PAMP19021 973 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 IVDP26440 423 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 PGGT1BP53609 377 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 PNLIPRP1P54315 467 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 ARSFP54793 590 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 ARF3P61204 181 aaPredicted RBP11.87□□□□□ -0.51
GCN1-204ENST00000548132 MRPL49Q13405 166 aaKnown RBP11.87□□□□□ -0.51
GCN1-204ENST00000548132 ZXDCQ2QGD7 858 aaPredicted RBP11.87□□□□□ -0.51
GCN1-204ENST00000548132 ZC3H12BQ5HYM0 836 aaKnown RBP11.87□□□□□ -0.51
GCN1-204ENST00000548132 WASHC2DQ5SRD0 308 aa11.87□□□□□ -0.51
GCN1-204ENST00000548132 RBM20Q5T481 1227 aaKnown RBP11.87□□□□□ -0.51
GCN1-204ENST00000548132 ICE2Q659A1 982 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms