RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ENDOVQ8N8Q3 282 aaKnown RBP15.25■□□□□ 0.03
DDX54-204ENST00000546898 GPATCH11Q8N954 259 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 MCOLN3Q8TDD5 553 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 EEF1AKMT1Q8WVE0 214 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 LINGO1Q96FE5 620 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 GBP5Q96PP8 586 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 RUFY1Q96T51 708 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 SELENOSQ9BQE4 189 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 MRPS30Q9NP92 439 aaKnown RBP15.25■□□□□ 0.03
DDX54-204ENST00000546898 SAYSD1Q9NPB0 183 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 GEMIN8Q9NWZ8 242 aaKnown RBP15.25■□□□□ 0.03
DDX54-204ENST00000546898 UTP6Q9NYH9 597 aaKnown RBP15.25■□□□□ 0.03
DDX54-204ENST00000546898 SNX7Q9UNH6 387 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 PADI2Q9Y2J8 665 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 VWA7Q9Y334 891 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 CCDC88CQ9P219 2028 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 SRPX2O60687 465 aaPredicted RBP15.24■□□□□ 0.03
DDX54-204ENST00000546898 CTSBP07858 339 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 CD63P08962 238 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 GSTA2P09210 222 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 IMPA1P29218 277 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 IL2P60568 153 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 RPS18P62269 152 aaKnown RBP15.24■□□□□ 0.03
DDX54-204ENST00000546898 ABATP80404 500 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 PRDX1Q06830 199 aaKnown RBP15.24■□□□□ 0.03
DDX54-204ENST00000546898 KCNAB2Q13303 367 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 GRM7Q14831 915 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 NCF4Q15080 339 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 ICE2Q659A1 982 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 LCN10Q6JVE6 187 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 C8orf74Q6P047 294 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 SUSD1Q6UWL2 747 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 STRA8Q7Z7C7 330 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 LRRC56Q8IYG6 542 aaPredicted RBP15.24■□□□□ 0.03
DDX54-204ENST00000546898 TTC29Q8NA56 475 aaPredicted RBP15.24■□□□□ 0.03
DDX54-204ENST00000546898 THAP4Q8WY91 577 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 CDKL2Q92772 493 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 CCDC138Q96M89 665 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 DPH7Q9BTV6 452 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 ACAT2Q9BWD1 397 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 PARVBQ9HBI1 364 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 SLC6A20Q9NP91 592 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 TAC3Q9UHF0 121 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 TCFL5Q9UL49 500 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 PSAT1Q9Y617 370 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 ZNF462Q96JM2 2506 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 NUP210LQ5VU65 1888 aa15.24■□□□□ 0.03
DDX54-204ENST00000546898 A0A1B0GX78 115 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 FITM1A5D6W6 292 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 KIF2AO00139 706 aaPredicted RBP15.23■□□□□ 0.03
DDX54-204ENST00000546898 CTSVO60911 334 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 URI1O94763 535 aaPredicted RBP15.23■□□□□ 0.03
DDX54-204ENST00000546898 TSPAN12O95859 305 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 FURINP09958 794 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 PLTPP55058 493 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 DCDP81605 110 aaKnown RBP15.23■□□□□ 0.03
DDX54-204ENST00000546898 TSTA3Q13630 321 aaPredicted RBP15.23■□□□□ 0.03
DDX54-204ENST00000546898 CYS1Q717R9 158 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 ZC3HC1Q86WB0 502 aaKnown RBP15.23■□□□□ 0.03
DDX54-204ENST00000546898 SPNS2Q8IVW8 549 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 PPFIBP2Q8ND30 876 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 FBXO25Q8TCJ0 367 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 OLFM1Q99784 485 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 ZFYVE21Q9BQ24 234 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 PLCD4Q9BRC7 762 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 RHOJQ9H4E5 214 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 CCDC177Q9NQR7 707 aaPredicted RBP15.23■□□□□ 0.03
DDX54-204ENST00000546898 STOX2Q9P2F5 926 aaPredicted RBP15.23■□□□□ 0.03
DDX54-204ENST00000546898 DHCR7Q9UBM7 475 aaKnown RBP15.23■□□□□ 0.03
DDX54-204ENST00000546898 GPN3Q9UHW5 284 aaPredicted RBP15.23■□□□□ 0.03
DDX54-204ENST00000546898 ADAMTS6Q9UKP5 1117 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 PDE10AQ9Y233 779 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 MAN2B2Q9Y2E5 1009 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 KCNMB2Q9Y691 235 aa15.23■□□□□ 0.03
DDX54-204ENST00000546898 FAM95CA0A1B0GW59 222 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 PABPN1LA6NDY0 278 aaKnown RBP15.22■□□□□ 0.03
DDX54-204ENST00000546898 DSCR3O14972 297 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 ENO2P09104 434 aaPredicted RBP15.22■□□□□ 0.03
DDX54-204ENST00000546898 HIST1H2AGP0C0S8 130 aaPredicted RBP15.22■□□□□ 0.03
DDX54-204ENST00000546898 ZNF37AP17032 561 aaPredicted RBP15.22■□□□□ 0.03
DDX54-204ENST00000546898 HIST1H2ADP20671 130 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 CCND1P24385 295 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 AP1S2P56377 157 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 TBPL1P62380 186 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 RELAQ04206 551 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 IL10RAQ13651 578 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 FAM214AQ32MH5 1076 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 THEMIS2Q5TEJ8 643 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 C1orf189Q5VU69 101 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 ZNF425Q6IV72 752 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 PAQR7Q86WK9 346 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 APLFQ8IW19 511 aaPredicted RBP15.22■□□□□ 0.03
DDX54-204ENST00000546898 ADAMTS17Q8TE56 1095 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 PDLIM5Q96HC4 596 aaKnown RBP15.22■□□□□ 0.03
DDX54-204ENST00000546898 HIST1H2AHQ96KK5 128 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 HIST1H2AJQ99878 128 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 H2AFJQ9BTM1 129 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 PCBD2Q9H0N5 130 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 SLC25A18Q9H1K4 315 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 POPDC3Q9HBV1 291 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms