RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 ACAP2Q15057 778 aa16.83■□□□□ 0.28
CD9-211ENST00000546073 CDKL4Q5MAI5 379 aa16.83■□□□□ 0.28
CD9-211ENST00000546073 SULT1C3Q6IMI6 304 aa16.83■□□□□ 0.28
CD9-211ENST00000546073 TMEM207Q6UWW9 146 aa16.83■□□□□ 0.28
CD9-211ENST00000546073 C6orf15Q6UXA7 325 aaPredicted RBP16.83■□□□□ 0.28
CD9-211ENST00000546073 CMC1Q7Z7K0 106 aa16.83■□□□□ 0.28
CD9-211ENST00000546073 CACNA2D3Q8IZS8 1091 aa16.83■□□□□ 0.28
CD9-211ENST00000546073 ZNF655Q8N720 491 aaPredicted RBP16.83■□□□□ 0.28
CD9-211ENST00000546073 OR2A1Q8NGT9 310 aa16.83■□□□□ 0.28
CD9-211ENST00000546073 ANKRD49Q8WVL7 239 aa16.83■□□□□ 0.28
CD9-211ENST00000546073 KIAA1191Q96A73 305 aa16.83■□□□□ 0.28
CD9-211ENST00000546073 DPH7Q9BTV6 452 aa16.83■□□□□ 0.28
CD9-211ENST00000546073 NDC1Q9BTX1 674 aa16.83■□□□□ 0.28
CD9-211ENST00000546073 SRPK3Q9UPE1 567 aa16.83■□□□□ 0.28
CD9-211ENST00000546073 KCNE2Q9Y6J6 123 aa16.83■□□□□ 0.28
CD9-211ENST00000546073 A0A1W2PNU3 283 aaPredicted RBP16.82■□□□□ 0.28
CD9-211ENST00000546073 TRIM49D1C9J1S8 452 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 RAD1O60671 282 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 IPO13O94829 963 aaKnown RBP16.82■□□□□ 0.28
CD9-211ENST00000546073 KIAA0754O94854 1291 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 C1QAP02745 245 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 RBP1P09455 135 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 COL6A2P12110 1019 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 CD1DP15813 335 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 TFEBP19484 476 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 EIF2S3P41091 472 aaKnown RBP16.82■□□□□ 0.28
CD9-211ENST00000546073 GRIA3P42263 894 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 ARSFP54793 590 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 TBPL1P62380 186 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 PHKG1Q16816 387 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 FAM214AQ32MH5 1076 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 LCTLQ6UWM7 567 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 CDHR3Q6ZTQ4 885 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 ZFAND4Q86XD8 727 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 MCATQ8IVS2 390 aaKnown RBP16.82■□□□□ 0.28
CD9-211ENST00000546073 SPATA6LQ8N4H0 392 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 EXT2Q93063 718 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 PPM1MQ96MI6 270 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 NRTNQ99748 197 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 C17orf62Q9BQA9 187 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 SELENOSQ9BQE4 189 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 PARD6BQ9BYG5 372 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 APMAPQ9HDC9 416 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 TMEM184CQ9NVA4 438 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 FOXJ2Q9P0K8 574 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 PADI1Q9ULC6 663 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 TMCO1Q9UM00 188 aa16.82■□□□□ 0.28
CD9-211ENST00000546073 PMS2P1A4D2B8 440 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 NCF1BA6NI72 391 aaPredicted RBP16.81■□□□□ 0.28
CD9-211ENST00000546073 NCF1CA8MVU1 366 aaPredicted RBP16.81■□□□□ 0.28
CD9-211ENST00000546073 SUPT3HB4E1H0 165 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 SUPT3HO75486 399 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 KLHL2O95198 593 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 SLC35E2BP0CK96 405 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 PIM1P11309 404 aaPredicted RBP16.81■□□□□ 0.28
CD9-211ENST00000546073 NCF1P14598 390 aaPredicted RBP16.81■□□□□ 0.28
CD9-211ENST00000546073 EZRP15311 586 aaKnown RBP16.81■□□□□ 0.28
CD9-211ENST00000546073 KRT15P19012 456 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 PEBP1P30086 187 aaKnown RBP16.81■□□□□ 0.28
CD9-211ENST00000546073 PGGT1BP53609 377 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 MAP7Q14244 749 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 GRM7Q14831 915 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 TGFBIQ15582 683 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 KIAA1614Q5VZ46 1190 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 ADGRD1Q6QNK2 874 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 DCAKDQ8WVC6 231 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 ZNF501Q96CX3 271 aaPredicted RBP16.81■□□□□ 0.28
CD9-211ENST00000546073 UBXN10Q96LJ8 280 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 ZFYVE21Q9BQ24 234 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 ALG9Q9H6U8 611 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 ACTR5Q9H9F9 607 aaPredicted RBP16.81■□□□□ 0.28
CD9-211ENST00000546073 EURLQ9NYK6 297 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 ANGPTL3Q9Y5C1 460 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 PCDHB3Q9Y5E6 796 aa16.81■□□□□ 0.28
CD9-211ENST00000546073 KRT87PA6NCN2 255 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.8■□□□□ 0.28
CD9-211ENST00000546073 CLGNO14967 610 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 PRICKLE3O43900 615 aaPredicted RBP16.8■□□□□ 0.28
CD9-211ENST00000546073 KERAO60938 352 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 SMIM24O75264 130 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 EIF2S1P05198 315 aaKnown RBP16.8■□□□□ 0.28
CD9-211ENST00000546073 CD63P08962 238 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 GFAPP14136 432 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 CXCR2P25025 360 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 PSMB5P28074 263 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 CCR8P51685 355 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 YOD1Q5VVQ6 348 aaPredicted RBP16.8■□□□□ 0.28
CD9-211ENST00000546073 PWWP2BQ6NUJ5 590 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 SBSNQ6UWP8 590 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 LCA5Q86VQ0 697 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 FAM20CQ8IXL6 584 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 RHEBL1Q8TAI7 183 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 KCTD4Q8WVF5 259 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 NXNL1Q96CM4 212 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 CCNL2Q96S94 520 aaPredicted RBP16.8■□□□□ 0.28
CD9-211ENST00000546073 PLCD4Q9BRC7 762 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 TXLNGYQ9BZA5 131 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 UNKQ9C0B0 810 aaKnown RBP16.8■□□□□ 0.28
CD9-211ENST00000546073 NUDT4Q9NZJ9 180 aa16.8■□□□□ 0.28
CD9-211ENST00000546073 TBK1Q9UHD2 729 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms