RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 MDM1Q8TC05 714 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 ACMSDQ8TDX5 336 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 USP7Q93009 1102 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 ZUFSPQ96AP4 578 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 PYCR2Q96C36 320 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 OR6C1Q96RD1 312 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 DDA1Q9BW61 102 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 ROPN1BQ9BZX4 212 aaPredicted RBP19.7■□□□□ 0.74
HMGA2-211ENST00000545998 B3GNT4Q9C0J1 378 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 ROPN1Q9HAT0 212 aaPredicted RBP19.7■□□□□ 0.74
HMGA2-211ENST00000545998 APMAPQ9HDC9 416 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 FAM60AQ9NP50 221 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 ABCF3Q9NUQ8 709 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 PCMTD2Q9NV79 361 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 INTS7Q9NVH2 962 aaKnown RBP19.7■□□□□ 0.74
HMGA2-211ENST00000545998 CFAP47Q6ZTR5 3102 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 IGKV1-8A0A0C4DH67 115 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 TARM1B6A8C7 271 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 C9orf172C9J069 976 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 MAP3K7O43318 606 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 CCNDBP1O95273 360 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 ACY1Q03154 408 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 TUBB3Q13509 450 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 TSNAXIP1Q2TAA8 658 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 PRAMEF13Q5VWM6 474 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 CDHR3Q6ZTQ4 885 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 PCBD2Q9H0N5 130 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 SLC6A20Q9NP91 592 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 MRPS30Q9NP92 439 aaKnown RBP19.7■□□□□ 0.74
HMGA2-211ENST00000545998 DKK4Q9UBT3 224 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 PCDHGA7Q9Y5G6 932 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 PCDHGA3Q9Y5H0 932 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 MDC1Q14676 2089 aaKnown RBP19.69■□□□□ 0.74
HMGA2-211ENST00000545998 SDK2Q58EX2 2172 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 A0A1W2PPM1 405 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 TLDC2A0PJX2 215 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 FOXO6A8MYZ6 492 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 C1QTNF9BB2RNN3 333 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 POLR1CO15160 346 aaPredicted RBP19.69■□□□□ 0.74
HMGA2-211ENST00000545998 NVLO15381 856 aaKnown RBP19.69■□□□□ 0.74
HMGA2-211ENST00000545998 MT-ND3P03897 115 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 C1QTNF9P0C862 333 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 NPPBP16860 134 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 ERVPABLB-1P60509 514 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 ABATP80404 500 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 IL11RAQ14626 422 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 GPR19Q15760 415 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 PTCHD3Q3KNS1 767 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 TECRLQ5HYJ1 363 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 DCAF12Q5T6F0 453 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 LCTLQ6UWM7 567 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 UNQ6494/PRO21346Q6UXR6 183 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 KLHDC8AQ8IYD2 350 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 TCAIMQ8N3R3 496 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 RIBC1Q8N443 379 aaPredicted RBP19.69■□□□□ 0.74
HMGA2-211ENST00000545998 DNAJC22Q8N4W6 341 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 EXT2Q93063 718 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 ALKBH8Q96BT7 664 aaKnown RBP19.69■□□□□ 0.74
HMGA2-211ENST00000545998 ZNF501Q96CX3 271 aaPredicted RBP19.69■□□□□ 0.74
HMGA2-211ENST00000545998 ZNF578Q96N58 590 aaPredicted RBP19.69■□□□□ 0.74
HMGA2-211ENST00000545998 CTRCQ99895 268 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 DPH7Q9BTV6 452 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 TMEM109Q9BVC6 243 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 FGF21Q9NSA1 209 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 NUDT4Q9NZJ9 180 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 CD274Q9NZQ7 290 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 LGALS13Q9UHV8 139 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 B3GALT1Q9Y5Z6 326 aa19.69■□□□□ 0.74
HMGA2-211ENST00000545998 ZZEF1O43149 2961 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 SYCE1LA8MT33 242 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 UBXN8O00124 270 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 TAPBPO15533 448 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 HCRTR1O43613 425 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 PYGBP11216 843 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 FGF5P12034 268 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 MTHFD2P13995 350 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 SLC5A2P31639 672 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 GGT5P36269 586 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 SLC6A12P48065 614 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 GABRA4P48169 554 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 NAA25Q14CX7 972 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 C18orf21Q32NC0 220 aaPredicted RBP19.68■□□□□ 0.74
HMGA2-211ENST00000545998 TBC1D25Q3MII6 688 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 BEND6Q5SZJ8 279 aaPredicted RBP19.68■□□□□ 0.74
HMGA2-211ENST00000545998 SULT1C3Q6IMI6 304 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 CYB5D1Q6P9G0 228 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 CEACAM20Q6UY09 585 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 SH2D5Q6ZV89 423 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 IQCKQ8N0W5 287 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 HNRNPLLQ8WVV9 542 aaKnown RBP19.68■□□□□ 0.74
HMGA2-211ENST00000545998 OR4K3Q96R72 315 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 ZPBPQ9BS86 351 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 TMEM79Q9BSE2 394 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 ASPSCR1Q9BZE9 553 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 CCDC86Q9H6F5 360 aaKnown RBP19.68■□□□□ 0.74
HMGA2-211ENST00000545998 THSD1Q9NS62 852 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 FOXJ2Q9P0K8 574 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 ANKMY1Q9P2S6 941 aa19.68■□□□□ 0.74
HMGA2-211ENST00000545998 PTBP2Q9UKA9 531 aaKnown RBP19.68■□□□□ 0.74
HMGA2-211ENST00000545998 SH2B3Q9UQQ2 575 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms