RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 A0A1W2PQ72 361 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 LEUTXA8MZ59 168 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 PPEF2O14830 753 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 TLR5O60602 858 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 OLFM2O95897 454 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 TBX18O95935 607 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 IFNA16P05015 189 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 RBP1P09455 135 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ODC1P11926 461 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 CD1EP15812 388 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 HOXB8P17481 243 aaPredicted RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 TNNI1P19237 187 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 CHMP24386 653 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 CTNNB1P35222 781 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 CBX5P45973 191 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 SLC15A1P46059 708 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 GSK3BP49841 420 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ERVFC1P60507 584 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 OLR1P78380 273 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 GPLD1P80108 840 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 SLC13A2Q13183 592 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 GPR17Q13304 367 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 C2CD6Q53TS8 623 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 KCNT1Q5JUK3 1230 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 DENND5AQ6IQ26 1287 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 METTL2BQ6P1Q9 378 aaKnown RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 BLOC1S3Q6QNY0 202 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 NPNTQ6UXI9 565 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 SPPL2CQ8IUH8 684 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 TCAIMQ8N3R3 496 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 FNDC5Q8NAU1 212 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 SMRP1Q8NCR6 262 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 HTRA1Q92743 480 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ANAPC16Q96DE5 110 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 NUAK2Q9H093 628 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.13□□□□□ -1.59
USP28-213ENST00000544967 TOR3AQ9H497 397 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 SLC28A3Q9HAS3 691 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 CISHQ9NSE2 258 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 DDX28Q9NUL7 540 aaKnown RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 SLCO3A1Q9UIG8 710 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 KCNE2Q9Y6J6 123 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 DOCK8Q8NF50 2099 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 LOC100130705A0A1B0GUX0 176 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 A0A1B0GVM2 712 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 A8MU76 341 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 EFCAB9A8MZ26 197 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 TBX1O43435 398 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 PROM1O43490 865 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 CILPO75339 1184 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 AP2A1O95782 977 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 HMGN1P05114 100 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 PRR35P0CG20 571 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 SPNP16150 400 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ALAS2P22557 587 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 IGFBP6P24592 240 aaPredicted RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 PTBP1P26599 531 aaKnown RBP eCLIP5.13□□□□□ -1.59
USP28-213ENST00000544967 CD6P30203 668 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 OXTRP30559 389 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 HTR2BP41595 481 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 IL12RB1P42701 662 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 LHX1P48742 406 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 SULT1E1P49888 294 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 NAGLUP54802 743 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ZNF33AQ06730 810 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 CDK5R2Q13319 367 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 RCAN2Q14206 197 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 MFSD13AQ14CX5 517 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 SMTNL2Q2TAL5 461 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 TIMM50Q3ZCQ8 353 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 RAB41Q5JT25 222 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 PRSS36Q5K4E3 855 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 TSTD2Q5T7W7 516 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ZBTB37Q5TC79 503 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 RSPO2Q6UXX9 243 aaPredicted RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 DBX2Q6ZNG2 339 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 TAS1R1Q7RTX1 841 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ABI1Q8IZP0 508 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 RBFAQ8N0V3 343 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 OVCA2Q8WZ82 227 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 CENPIQ92674 756 aaPredicted RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 ZNF707Q96C28 371 aaPredicted RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 PITX2Q99697 317 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 OR51B5Q9H339 312 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 TASP1Q9H6P5 420 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ACOT13Q9NPJ3 140 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 HPF1Q9NWY4 346 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ADPRHL2Q9NX46 363 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 TAS2R7Q9NYW3 318 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 BFARQ9NZS9 450 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 HMGXB4Q9UGU5 601 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 LEF1Q9UJU2 399 aaPredicted RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 CDH9Q9ULB4 789 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 BTRCQ9Y297 605 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ACOT9Q9Y305 439 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 OAS3Q9Y6K5 1087 aaKnown RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 AP1M2Q9Y6Q5 423 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 A0A0J9YYE9 177 aa5.12□□□□□ -1.59
USP28-213ENST00000544967 STMND1H3BQB6 276 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms