RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 SECISBP2Q96T21 854 aaKnown RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 AGAP2Q99490 1192 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 EIF3CQ99613 913 aaKnown RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 VKORC1Q9BQB6 163 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 MGME1Q9BQP7 344 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 YIPF4Q9BSR8 244 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 ZSCAN5AQ9BUG6 496 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 TLR10Q9BXR5 811 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 SLC39A8Q9C0K1 460 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 OR2AG1Q9H205 316 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 FAM83DQ9H4H8 585 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 FAM207AQ9NSI2 230 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 TXLNGQ9NUQ3 528 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 C14orf119Q9NWQ9 140 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 PKD2L2Q9NZM6 624 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 ATXN10Q9UBB4 475 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 TINAGQ9UJW2 476 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CDC23Q9UJX2 597 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 FBXL4Q9UKA2 621 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CNOT6Q9ULM6 557 aaKnown RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 HPSEQ9Y251 543 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 DNAJC16Q9Y2G8 782 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF835Q9Y2P0 537 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.93□□□□□ -1.782e-26■□□□□ 8.9
SNHG1-220ENST00000544550 MED13LQ71F56 2210 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 HIVEP3Q5T1R4 2406 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 A0A0J9YYE9 177 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 MYOCOSA0A1B0GUC4 107 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 C17orf113A0A1B0GUU1 675 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 FAM237BA0A1B0GVD1 139 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 BICDL2A1A5D9 508 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 GSAPA4D1B5 854 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 EEF2KO00418 725 aaKnown RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 DAPK3O43293 454 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 LCA5LO95447 670 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 FGFR1OPO95684 399 aaKnown RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 TSPAN12O95859 305 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 MPIG6BO95866 241 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 TRBC1P01850 177 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 UMODP07911 640 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 UQCRHP07919 91 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 HOXD4P09016 255 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 ENO2P09104 434 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 TMEM253P0C7T8 217 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 BRAFP15056 766 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 ABOP16442 354 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 CTPS1P17812 591 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 TNFAIP3P21580 790 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 GPD1P21695 349 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 MST1P26927 711 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 NDUFS1P28331 727 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 SPAM1P38567 509 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 PEX19P40855 299 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 SPINT3P49223 89 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 KPNA2P52292 529 aaKnown RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF135P52742 658 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 DRG2P55039 364 aaKnown RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 RPL26P61254 145 aaKnown RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 AP2B1P63010 937 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 KRT85P78386 507 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 SRSF3P84103 164 aaKnown RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 TRAF2Q12933 501 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 CDSNQ15517 529 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 NKAIN1Q4KMZ8 207 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 ANKRD20A8PQ5CZ79 823 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF789Q5FWF6 425 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 TMEM211Q6ICI0 200 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 TTI2Q6NXR4 508 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 SCYL2Q6P3W7 929 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 TLDC1Q6P9B6 456 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 NAPRTQ6XQN6 538 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 RFLNAQ6ZTI6 216 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 KBTBD2Q8IY47 623 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 CLYBLQ8N0X4 340 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 PYROXD2Q8N2H3 581 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 EMC1Q8N766 993 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 SIMC1Q8NDZ2 872 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 C1orf162Q8NEQ5 155 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 GOT1L1Q8NHS2 421 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 FKBP10Q96AY3 582 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 GPR137Q96N19 417 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 GSDMAQ96QA5 445 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 LYSMD1Q96S90 227 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 TMEM121Q9BTD3 319 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 NAA15Q9BXJ9 866 aaKnown RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 POLDIP3Q9BY77 421 aaKnown RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 XPO4Q9C0E2 1151 aaKnown RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 CNTD2Q9H8S5 307 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 WDR54Q9H977 334 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 NOD2Q9HC29 1040 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 FAM53CQ9NYF3 392 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 NXT1Q9UKK6 140 aaKnown RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 FZD10Q9ULW2 581 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 RPL26L1Q9UNX3 145 aaKnown RBP3.92□□□□□ -1.78
SNHG1-220ENST00000544550 COLEC10Q9Y6Z7 277 aa3.92□□□□□ -1.78
SNHG1-220ENST00000544550 C1orf232A0A0U1RR37 186 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 FAM237AA0A1B0GTK4 181 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 KLHL33A6NCF5 533 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 OR6C74A6NCV1 312 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF839A8K0R7 811 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms