RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 UHMK1Q8TAS1 419 aaKnown RBP18.37■□□□□ 0.53
DDX55-211ENST00000544429 KIAA1191Q96A73 305 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 HIST1H2AHQ96KK5 128 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 HIST1H2AJQ99878 128 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 H2AFJQ9BTM1 129 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 ACAT2Q9BWD1 397 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 TRIM54Q9BYV2 358 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 ULBP3Q9BZM4 244 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 CCDC177Q9NQR7 707 aaPredicted RBP18.37■□□□□ 0.53
DDX55-211ENST00000544429 SNX15Q9NRS6 342 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 IGSF5Q9NSI5 407 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 CTNNAL1Q9UBT7 734 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 TAC3Q9UHF0 121 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 TMEM150CB9EJG8 249 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 NRP2O60462 931 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 KIAA0754O94854 1291 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 CTSBP07858 339 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 CCND1P24385 295 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 CNTFP26441 200 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 ITPKBP27987 946 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 CMPK1P30085 196 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 OR4D1Q15615 310 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 UAP1Q16222 522 aaPredicted RBP18.36■□□□□ 0.53
DDX55-211ENST00000544429 CDKL4Q5MAI5 379 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 ADGRD1Q6QNK2 874 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 ZNF517Q6ZMY9 492 aaPredicted RBP18.36■□□□□ 0.53
DDX55-211ENST00000544429 RNF44Q7L0R7 432 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 ISCA2Q86U28 154 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 KLHDC8AQ8IYD2 350 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 SLC38A9Q8NBW4 561 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 NAF1Q96HR8 494 aaKnown RBP18.36■□□□□ 0.53
DDX55-211ENST00000544429 LRFN5Q96NI6 719 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 DCBLD2Q96PD2 775 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 PLCD4Q9BRC7 762 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 DPH7Q9BTV6 452 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 PCBD2Q9H0N5 130 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 ATG10Q9H0Y0 220 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 FANCEQ9HB96 536 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 PLCL2Q9UPR0 1127 aa18.36■□□□□ 0.53
DDX55-211ENST00000544429 A0A087X1B8 175 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 EXOC1LA0A1B0GW35 172 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 KLK10O43240 276 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 RAD1O60671 282 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 CCNDBP1O95273 360 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 NPPBP16860 134 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 MSH2P43246 934 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 HNMTP50135 292 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 SERPINB8P50452 374 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 ITGA1P56199 1179 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 NAE1Q13564 534 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 CSHL1Q14406 222 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 TGFBIQ15582 683 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 DEFB110Q30KQ9 67 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 PRAMEF13Q5VWM6 474 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 FBXO42Q6P3S6 717 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 LCTLQ6UWM7 567 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 PAQR7Q86WK9 346 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 MCATQ8IVS2 390 aaKnown RBP18.35■□□□□ 0.53
DDX55-211ENST00000544429 NLGN4XQ8N0W4 816 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 NLGN4YQ8NFZ3 816 aaPredicted RBP18.35■□□□□ 0.53
DDX55-211ENST00000544429 ATL1Q8WXF7 558 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 OR4K3Q96R72 315 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 UNKQ9C0B0 810 aaKnown RBP18.35■□□□□ 0.53
DDX55-211ENST00000544429 MRPS30Q9NP92 439 aaKnown RBP18.35■□□□□ 0.53
DDX55-211ENST00000544429 UTP6Q9NYH9 597 aaKnown RBP18.35■□□□□ 0.53
DDX55-211ENST00000544429 EURLQ9NYK6 297 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 SERTAD3Q9UJW9 196 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 SH2B3Q9UQQ2 575 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 ACOT9Q9Y305 439 aa18.35■□□□□ 0.53
DDX55-211ENST00000544429 CACNA1BQ00975 2339 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 TEX51A0A1B0GUA7 166 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 CCDC189A1A4V9 331 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 POC1B-GALNT4F8VUJ3 575 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 TERTO14746 1132 aaKnown RBP18.34■□□□□ 0.53
DDX55-211ENST00000544429 EFSO43281 561 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 SCRG1O75711 98 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 GUCA1CO95843 209 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 LTA4HP09960 611 aaKnown RBP18.34■□□□□ 0.53
DDX55-211ENST00000544429 RORAP35398 523 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 GGT5P36269 586 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 KCNC1P48547 511 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 ABHD18Q0P651 414 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 ZC3H12BQ5HYM0 836 aaKnown RBP18.34■□□□□ 0.53
DDX55-211ENST00000544429 PRAMEF17Q5VTA0 474 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 LRRC69Q6ZNQ3 347 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 RAPH1Q70E73 1250 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 TBC1D1Q86TI0 1168 aaPredicted RBP18.34■□□□□ 0.53
DDX55-211ENST00000544429 ESX1Q8N693 406 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 AENQ8WTP8 325 aaKnown RBP18.34■□□□□ 0.53
DDX55-211ENST00000544429 SNRNP27Q8WVK2 155 aaKnown RBP18.34■□□□□ 0.53
DDX55-211ENST00000544429 RHBDF1Q96CC6 855 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 GPR78Q96P69 363 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 ATOH8Q96SQ7 321 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 SYNPO2LQ9H987 977 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 NMRAL1Q9HBL8 299 aa18.34■□□□□ 0.53
DDX55-211ENST00000544429 CUEDC1Q9NWM3 386 aaPredicted RBP18.34■□□□□ 0.53
DDX55-211ENST00000544429 A0A096LPK6 155 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 FITM1A5D6W6 292 aa18.33■□□□□ 0.52
DDX55-211ENST00000544429 CPNE3O75131 537 aaKnown RBP18.33■□□□□ 0.52
DDX55-211ENST00000544429 KRT38O76015 456 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms