RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 KIAA0040Q15053 153 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 DNAJB7Q7Z6W7 309 aaPredicted RBP14.91□□□□□ -0.02
CNOT9-208ENST00000542068 TSPAN33Q86UF1 283 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 HIPK1Q86Z02 1210 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 CCDC103Q8IW40 242 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 KCNJ9Q92806 393 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 DCSTAMPQ9H295 470 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 KRT84Q9NSB2 600 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 SCHIP1Q9P0W5 487 aaPredicted RBP14.91□□□□□ -0.02
CNOT9-208ENST00000542068 SNX8Q9Y5X2 465 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 SLC22A1O15245 554 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 GABARAPO95166 117 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 TCEA1P23193 301 aaKnown RBP14.91□□□□□ -0.02
CNOT9-208ENST00000542068 RPS3AP61247 264 aaKnown RBP14.91□□□□□ -0.02
CNOT9-208ENST00000542068 CREMQ03060 361 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 RING1Q06587 406 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 ELAVL2Q12926 359 aaKnown RBP14.91□□□□□ -0.02
CNOT9-208ENST00000542068 GBX1Q14549 363 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 HIST2H2ACQ16777 129 aaPredicted RBP14.91□□□□□ -0.02
CNOT9-208ENST00000542068 CPZQ66K79 652 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 EID2BQ96D98 161 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 DEFB118Q96PH6 123 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 FAM126AQ9BYI3 521 aaPredicted RBP14.91□□□□□ -0.02
CNOT9-208ENST00000542068 DSN1Q9H410 356 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 SRRDQ9UH36 339 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 TNPO3Q9Y5L0 923 aaKnown RBP14.91□□□□□ -0.02
CNOT9-208ENST00000542068 SPNP16150 400 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 ZNF7P17097 686 aaPredicted RBP14.91□□□□□ -0.02
CNOT9-208ENST00000542068 TGM1P22735 817 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 CD40LGP29965 261 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 KRT20P35900 424 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 RGS4P49798 205 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 GABARAPL2P60520 117 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 VLDLRP98155 873 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 PRSS36Q5K4E3 855 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 ADGRG2Q8IZP9 1017 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 PJA1Q8NG27 643 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 S100ZQ8WXG8 99 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 MYO19Q96H55 970 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 MANBAO00462 879 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 ITPKAP23677 461 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 GABRR2P28476 465 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 RPS14P62263 151 aaKnown RBP14.9□□□□□ -0.02
CNOT9-208ENST00000542068 KCNC4Q03721 635 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 ILF2Q12905 390 aaKnown RBP14.9□□□□□ -0.02
CNOT9-208ENST00000542068 SELENBP1Q13228 472 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 TCTN1Q2MV58 587 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 OR2T5Q6IEZ7 315 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 RFLNAQ6ZTI6 216 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 ZNF551Q7Z340 670 aaPredicted RBP14.9□□□□□ -0.02
CNOT9-208ENST00000542068 P3H2Q8IVL5 708 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 OR2T29Q8NH02 315 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 ZNF641Q96N77 438 aaPredicted RBP14.9□□□□□ -0.02
CNOT9-208ENST00000542068 SH3GL1Q99961 368 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 TRIT1Q9H3H1 467 aaKnown RBP14.9□□□□□ -0.02
CNOT9-208ENST00000542068 ARL15Q9NXU5 204 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 USE1Q9NZ43 259 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 DHRS7Q9Y394 339 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 MYO16Q9Y6X6 1858 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 ILVBLA1L0T0 632 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 SNPHO15079 494 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 PDYNP01213 254 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 ESR1P03372 595 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 POU2F1P14859 743 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 EPB42P16452 691 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 ITGALP20701 1170 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 PTGER3P43115 390 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 FXNQ16595 210 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 GPR149Q86SP6 731 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 TMEM132CQ8N3T6 1108 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 ATG10Q9H0Y0 220 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 EHD1Q9H4M9 534 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 ELOVL6Q9H5J4 265 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 FNIP2Q9P278 1114 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 CLEC4EQ9ULY5 219 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 VPS9D1Q9Y2B5 631 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 YIPF1Q9Y548 306 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 IFRD1O00458 451 aaPredicted RBP14.9□□□□□ -0.02
CNOT9-208ENST00000542068 AIREO43918 545 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 OPN1SWP03999 348 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 IL6P05231 212 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 HOXD10P28358 340 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 LIPAP38571 399 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 CHRNA6Q15825 494 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 AADATQ8N5Z0 425 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 DYNC2LI1Q8TCX1 351 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 MAL2Q969L2 176 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 PANX1Q96RD7 426 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 BBS2Q9BXC9 721 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 C1QTNF3Q9BXJ4 246 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 ACPTQ9BZG2 426 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 REXO4Q9GZR2 422 aaKnown RBP14.9□□□□□ -0.02
CNOT9-208ENST00000542068 ACOT13Q9NPJ3 140 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 AASDHPPTQ9NRN7 309 aa14.9□□□□□ -0.02
CNOT9-208ENST00000542068 DYTNA2CJ06 578 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 A8MV72 311 aaPredicted RBP14.89□□□□□ -0.03
CNOT9-208ENST00000542068 TTC34A8MYJ7 566 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 CEP290O15078 2479 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 CCDC159P0C7I6 412 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 TRPC1P48995 793 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms