RNA–Protein interactions for RNA: ENST00000541968.1

RAP1B-226, Transcript of RAP1B, member of RAS oncogene family, human

TSL 3

Gene RAP1B, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-226	ENST00000541968	FAM129A	Q9BZQ8	928 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	RIBC2	Q9H4K1	309 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	CRLF2	Q9HC73	371 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	RRP7BP	Q9NSQ0	103 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	CHCHD3	Q9NX63	227 aa	Known RBP	4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	CNIH4	Q9P003	139 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	SEPT10	Q9P0V9	454 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	ASB3	Q9Y575	518 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968		A6NL46	340 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	ANXA2P2	A6NMY6	339 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	KPNA7	A9QM74	516 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	SMIM1	B2RUZ4	78 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968		H0YIV9	168 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	ANKRD28	O15084	1053 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	T	O15178	435 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	PCDH7	O60245	1069 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	DIAPH2	O60879	1101 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	CTSV	O60911	334 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	NKX2-2	O95096	273 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	CAVIN2	O95810	425 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	PAH	P00439	452 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	PENK	P01210	267 aa	Predicted RBP	4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	PATE4	P0C8F1	98 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	TSPY4	P0CV99	314 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	TSPY10	P0CW01	314 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	RNF224	P0DH78	156 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	UROS	P10746	265 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	PAX7	P23759	505 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	HOXA13	P31271	388 aa	Predicted RBP	4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	HOXC9	P31274	260 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	RFC4	P35249	363 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	SOAT1	P35610	550 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	MDH1	P40925	334 aa	Known RBP	4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	TAF6	P49848	677 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	ELP6	Q0PNE2	266 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	CHIT1	Q13231	466 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	PPIG	Q13427	754 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	OLIG2	Q13516	323 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	ZNF273	Q14593	569 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	IL11RA	Q14626	422 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	WDR38	Q5JTN6	314 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	RIPPLY2	Q5TAB7	128 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	PM20D1	Q6GTS8	502 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	MFSD7	Q6UXD7	560 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	TLK2	Q86UE8	772 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	UNC5CL	Q8IV45	518 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	CDH26	Q8IXH8	852 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	KDM8	Q8N371	416 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	STPG4	Q8N801	248 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	RBM15B	Q8NDT2	890 aa	Known RBP	4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	ZNF248	Q8NDW4	579 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	LPCAT1	Q8NF37	534 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	RRNAD1	Q96FB5	475 aa	Known RBP	4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	TMEM68	Q96MH6	324 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	EGFL8	Q99944	293 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	NUP85	Q9BW27	656 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	IARS2	Q9NSE4	1012 aa	Known RBP	4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	PSD3	Q9NYI0	1048 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	TMOD2	Q9NZR1	351 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	TRPC4	Q9UBN4	977 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	FBXL17	Q9UF56	701 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	TEKT2	Q9UIF3	430 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	NENF	Q9UMX5	172 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	KCNK7	Q9Y2U2	307 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	NOSIP	Q9Y314	301 aa	Known RBP	4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	MROH5	Q6ZUA9	1318 aa		4.16	□□□□□ -1.74
RAP1B-226	ENST00000541968	UNC13A	Q9UPW8	1703 aa		4.15	□□□□□ -1.74
RAP1B-226	ENST00000541968		A0A1B0GU03	582 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	FAM90A26	D6RGX4	464 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	BLOC1S5-TXNDC5	H3BN57	136 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968		M0QZ24	198 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	KIF2A	O00139	706 aa	Predicted RBP	4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	KCNN4	O15554	427 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	SPOP	O43791	374 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	PRKN	O60260	465 aa	Predicted RBP	4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	MTRF1	O75570	445 aa	Known RBP	4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	SPAG6	O75602	509 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	ASGR1	P07306	291 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	ZFY	P08048	801 aa	Predicted RBP	4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	FAM86B2	P0C5J1	330 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	ACTN1	P12814	892 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	UBA1	P22314	1058 aa	Known RBP	4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	CCND2	P30279	289 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	MC5R	P33032	325 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	RDX	P35241	583 aa	Known RBP	4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	AHR	P35869	848 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	PRKCI	P41743	596 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	PNLIPRP2	P54317	469 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	TRA2B	P62995	288 aa	Known RBP	4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	PRKCZ	Q05513	592 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	CSTF3	Q12996	717 aa	Known RBP	4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	DPYS	Q14117	519 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	LETM2	Q2VYF4	491 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	FILIP1L	Q4L180	1135 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	CCDC122	Q5T0U0	273 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	KRT79	Q5XKE5	535 aa		4.15	□□□□□ -1.75
RAP1B-226	ENST00000541968	ZCCHC12	Q6PEW1	402 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms