RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ZNF623O75123 536 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 ENGP17813 658 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 CORO1AP31146 461 aaKnown RBP10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 PTGER3P43115 390 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 MAPKAPK2P49137 400 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 TGM4P49221 684 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 ILF2Q12905 390 aaKnown RBP10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 SHQ1Q6PI26 577 aaKnown RBP10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 CALHM3Q86XJ0 350 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 CCDC103Q8IW40 242 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 VMP1Q96GC9 406 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 C8orf48Q96LL4 319 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 CHCHD6Q9BRQ6 235 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 TTPALQ9BTX7 342 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 CENPOQ9BU64 300 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 REXO4Q9GZR2 422 aaKnown RBP10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 RNF38Q9H0F5 515 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 GABRQQ9UN88 632 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 SNX6Q9UNH7 406 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 C2orf78A6NCI8 922 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 OAZ2O95190 189 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 ASGR1P07306 291 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 TYMPP19971 482 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 SERPINB1P30740 379 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 RYKP34925 604 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 CRYBA2P53672 197 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 HSPA14Q0VDF9 509 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 CHRNA6Q15825 494 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 KDM4DQ6B0I6 523 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 GLB1LQ6UWU2 654 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 HIPK1Q86Z02 1210 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 VRK3Q8IV63 474 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 FAM217AQ8IXS0 508 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 PEX13Q92968 403 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 MTERF1Q99551 399 aaKnown RBP10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 FAM126AQ9BYI3 521 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 IL26Q9NPH9 171 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 THUMPD1Q9NXG2 353 aaKnown RBP10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 FNIP2Q9P278 1114 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 ATP11BQ9Y2G3 1177 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 SCN10AQ9Y5Y9 1956 aa10.07□□□□□ -0.8
CDC42SE1-207ENST00000540998 DSCR3O14972 297 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 KDELR3O43731 214 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 AIREO43918 545 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 IL6P05231 212 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 RETP07949 1114 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 BMPR1AP36894 532 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 PCYT1AP49585 367 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 HUNKP57058 714 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 IFITM2Q01629 132 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 MBTPS1Q14703 1052 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 SYT6Q5T7P8 510 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 KLHL17Q6TDP4 642 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ANGPTL8Q6UXH0 198 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ANKS3Q6ZW76 656 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 SNX20Q7Z614 316 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ARMC8Q8IUR7 673 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 FATE1Q969F0 183 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 RDH12Q96NR8 316 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 PANX1Q96RD7 426 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 THG1LQ9NWX6 298 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ARL15Q9NXU5 204 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 SCN3BQ9NY72 215 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ANKMY1Q9P2S6 941 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 TET1Q8NFU7 2136 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 OR2A25A4D2G3 310 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 FAM227AF5H4B4 570 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 RFXAPO00287 272 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 SNPHO15079 494 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 COCHO43405 550 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 TLL1O43897 1013 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 GBAP04062 536 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 STSP08842 583 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 EPB42P16452 691 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 RHOAP61586 193 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ZNF177Q13360 481 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 NFE2Q16621 373 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 LRIT3Q3SXY7 679 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ALG1LQ6GMV1 187 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 CAPN13Q6MZZ7 669 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 CXorf57Q6NSI4 855 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 PLPP6Q8IY26 295 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 RHOXF1Q8NHV9 184 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 GTF3C2Q8WUA4 911 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 MYLIPQ8WY64 445 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 KCNS3Q9BQ31 491 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 PSD2Q9BQI7 771 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 MAGEH1Q9H213 219 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 RMI1Q9H9A7 625 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 FBXO8Q9NRD0 319 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ERVK13-1Q9NX77 482 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 CD84Q9UIB8 345 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 RNF6Q9Y252 685 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 TPRKBQ9Y3C4 175 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 FAM220BPB1ANY3 271 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 CLIC1O00299 241 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 PFDN6O15212 129 aa10.06□□□□□ -0.8
CDC42SE1-207ENST00000540998 ZNF24P17028 368 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms