RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 B3GALT4O96024 378 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 SLC35G4P0C7Q5 338 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 TCN1P20061 433 aaPredicted RBP11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 AK4P27144 223 aaPredicted RBP11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 CASP2P42575 452 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 KIAA1024LP59773 190 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 RCN1Q15293 331 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 TRMT5Q32P41 509 aaKnown RBP11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 ZNF852Q6ZMS4 543 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 RNF111Q6ZNA4 994 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 LINC01555Q8NAE3 123 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 JPH3Q8WXH2 748 aaPredicted RBP11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 TOE1Q96GM8 510 aaKnown RBP11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 MSANTD3Q96H12 275 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 C12orf66Q96MD2 445 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 EBPLQ9BY08 206 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 TPSD1Q9BZJ3 242 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 CARS2Q9HA77 564 aaKnown RBP11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 SGK2Q9HBY8 427 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 PFDN4Q9NQP4 134 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 GEMIN8Q9NWZ8 242 aaKnown RBP11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 ADA2Q9NZK5 511 aa11.86□□□□□ -0.51
AP003559.1-201ENST00000540906 A0A1W2PP18 115 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 FAM234BA2RU67 622 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 PRORSD1PA6NEY8 169 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 LRRC72A6NJI9 287 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 MAGEB17A8MXT2 336 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 GPR89AB7ZAQ6 455 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 UGDHO60701 494 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 GPR89BP0CG08 455 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 CDH1P12830 882 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 AMD1P17707 334 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 SDC1P18827 310 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 HNRNPA2B1P22626 353 aaKnown RBP11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 KELP23276 732 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 PXNP49023 591 aaPredicted RBP11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 CCR3P51677 355 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 SLC7A2P52569 658 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 PHC1P78364 1004 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 GRIK2Q13002 908 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 SLBPQ14493 270 aaKnown RBP eCLIP11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 NFATC4Q14934 902 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 HACD2Q6Y1H2 254 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 RD3Q7Z3Z2 195 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 OR7G3Q8NG95 312 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 RAD51AP1Q96B01 352 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 EGLN2Q96KS0 407 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 APOLD1Q96LR9 279 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 OR2M4Q96R27 311 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 FERD3LQ96RJ6 166 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 PCDHAC1Q9H158 963 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 CCDC177Q9NQR7 707 aaPredicted RBP11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 IMP3Q9NV31 184 aaKnown RBP11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 MRGBPQ9NV56 204 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 SPATA6Q9NWH7 488 aaPredicted RBP11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 CUEDC1Q9NWM3 386 aaPredicted RBP11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 TMEM181Q9P2C4 612 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 THEGQ9P2T0 379 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 CD300AQ9UGN4 299 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 CROTQ9UKG9 612 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 PPT2Q9UMR5 302 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 NDUFAF1Q9Y375 327 aa11.85□□□□□ -0.51
AP003559.1-201ENST00000540906 SERTM1A2A2V5 107 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 CCDC154A6NI56 674 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 BBIP1A8MTZ0 92 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 H0YIV9 168 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 NME4O00746 187 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 MAN2B1O00754 1011 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 FPGTO14772 594 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 ANGPT2O15123 496 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 EEDO75530 441 aaKnown RBP11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 IGLV3-19P01714 112 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 C1GALT1C1LP0DN25 315 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 PCNAP12004 261 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 GNAZP19086 355 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 JAK1P23458 1154 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 PRPH2P23942 346 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 CCND1P24385 295 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 KCNK10P57789 538 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 RAE1P78406 368 aaKnown RBP11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 PLIN5Q00G26 463 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 UBXN2BQ14CS0 331 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 CYP2A13Q16696 494 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 PRAMEF14Q5SWL7 426 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 PRAMEF13Q5VWM6 474 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 SYT13Q7L8C5 426 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 VN1R5Q7Z5H4 357 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 FAM20CQ8IXL6 584 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 SLC22A18ASQ8N1D0 253 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 TMEM145Q8NBT3 493 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 DENND6BQ8NEG7 585 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 OR13H1Q8NG92 308 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 HUS1BQ8NHY5 278 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 NRG4Q8WWG1 115 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 SLC5A11Q8WWX8 675 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 PYDC1Q8WXC3 89 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 WDR34Q96EX3 536 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 TSSK3Q96PN8 268 aa11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 TCEAL2Q9H3H9 227 aaPredicted RBP11.84□□□□□ -0.51
AP003559.1-201ENST00000540906 RMI1Q9H9A7 625 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms