RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 IRAK4Q9NWZ3 460 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 PLA2G3Q9NZ20 509 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 SUCOQ9UBS9 1254 aaKnown RBP6.96□□□□□ -1.3
YBX3-209ENST00000540747 C3orf18Q9UK00 162 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 RIMKLBQ9ULI2 386 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 ZNF835Q9Y2P0 537 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 MAU2Q9Y6X3 613 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 TRGV8A0A0C4DH27 118 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 DYTNA2CJ06 578 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 HYKKA2RU49 373 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 IDSB3KWA1 339 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 CCL21O00585 134 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 KDM1AO60341 852 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 WDPCPO95876 746 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 TUBB4AP04350 444 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 OR56A5P0C7T3 313 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 COX6B1P14854 86 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 AOAHP28039 575 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 PSMB5P28074 263 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 SSTR2P30874 369 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 KIR3DL1P43629 444 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 VSX2P58304 361 aaPredicted RBP6.95□□□□□ -1.3
YBX3-209ENST00000540747 EIF3EP60228 445 aaKnown RBP6.95□□□□□ -1.3
YBX3-209ENST00000540747 ARG2P78540 354 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 DSG2Q14126 1118 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 SEMA3AQ14563 771 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 POU6F1Q14863 301 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 C3AR1Q16581 482 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 PARP6Q2NL67 630 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 FAM214AQ32MH5 1076 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 SYTL3Q4VX76 610 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 VWA2Q5GFL6 755 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 XKRXQ6PP77 449 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 TMEM205Q6UW68 189 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 TMEM207Q6UWW9 146 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 Q6ZPB1 254 aaPredicted RBP6.95□□□□□ -1.3
YBX3-209ENST00000540747 CCDC50Q8IVM0 306 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 CHERPQ8IWX8 916 aaKnown RBP6.95□□□□□ -1.3
YBX3-209ENST00000540747 C2orf73Q8N5S3 287 aaPredicted RBP6.95□□□□□ -1.3
YBX3-209ENST00000540747 SIRT6Q8N6T7 355 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 AMER3Q8N944 861 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 TTC29Q8NA56 475 aaPredicted RBP6.95□□□□□ -1.3
YBX3-209ENST00000540747 OR2L3Q8NG85 312 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 OR2A1Q8NGT9 310 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 ADAMTS18Q8TE60 1221 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 ALG3Q92685 438 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 MIEF2Q96C03 454 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 C14orf79Q96F83 325 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 IMMP1LQ96LU5 166 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 CARD6Q9BX69 1037 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 OSBPL8Q9BZF1 889 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 TGIF2Q9GZN2 237 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 ZNF700Q9H0M5 742 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 LRRC40Q9H9A6 602 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 ZNF304Q9HCX3 659 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 INTS7Q9NVH2 962 aaKnown RBP6.95□□□□□ -1.3
YBX3-209ENST00000540747 ZNHIT6Q9NWK9 470 aaKnown RBP6.95□□□□□ -1.3
YBX3-209ENST00000540747 PIH1D1Q9NWS0 290 aaKnown RBP6.95□□□□□ -1.3
YBX3-209ENST00000540747 PTGFRNQ9P2B2 879 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 ZNF282Q9UDV7 671 aaPredicted RBP6.95□□□□□ -1.3
YBX3-209ENST00000540747 SLC2A6Q9UGQ3 507 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 CIDEBQ9UHD4 219 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 PCDHA3Q9Y5H8 950 aa6.95□□□□□ -1.3
YBX3-209ENST00000540747 NSG1A0A0A6YYJ2 146 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 IGKV1-8A0A0C4DH67 115 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 KRT87PA6NCN2 255 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 OR5H15A6NDH6 313 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 SLC19A2O60779 497 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 PRAMEF2O60811 474 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 ZNF189O75820 626 aaPredicted RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 STK10O94804 968 aaKnown RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 CRYABP02511 175 aaKnown RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 RPN2P04844 631 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 SNRPB2P08579 225 aaKnown RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 ITGAMP11215 1152 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 ERGP11308 486 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 FBLP22087 321 aaKnown RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 CTNNA2P26232 953 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 SLC26A3P40879 764 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 GDF10P55107 478 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 SNRPNP63162 240 aaKnown RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 YBX1P67809 324 aaKnown RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 PMP22Q01453 160 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 OCA2Q04671 838 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 SRSF11Q05519 484 aaKnown RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 EEF1A2Q05639 463 aaKnown RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 HSPA14Q0VDF9 509 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 TBX2Q13207 712 aaPredicted RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 GBX1Q14549 363 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 SF1Q15637 639 aaKnown RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 CCSMST1Q4G0I0 132 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 HIBCHQ6NVY1 386 aaPredicted RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 H3F3CQ6NXT2 135 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 AADACL2Q6P093 401 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 FBXO42Q6P3S6 717 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 DARS2Q6PI48 645 aaKnown RBP6.94□□□□□ -1.3
YBX3-209ENST00000540747 CNSTQ6PJW8 725 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 AFTPHQ6ULP2 937 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 ARHGEF18Q6ZSZ5 1173 aa6.94□□□□□ -1.3
YBX3-209ENST00000540747 TAX1BP1Q86VP1 789 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms