RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 VPS28Q9UK41 221 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 PA2G4Q9UQ80 394 aaKnown RBP2.99□□□□□ -1.93
MDM2-227ENST00000540709 TRIM17Q9Y577 477 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 MYH15Q9Y2K3 1946 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 FEZF1A0PJY2 475 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 TMEM221A6NGB7 291 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 ARPC2O15144 300 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 ALOX12P18054 663 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 MPZP25189 248 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 DNA2P51530 1060 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 CD300CQ08708 224 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 HSPB3Q12988 150 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 VEZF1Q14119 521 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 TMEM132DQ14C87 1099 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 PCLAFQ15004 111 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 FAM189A2Q15884 450 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 MCMDC2Q4G0Z9 681 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 NOTUMQ6P988 496 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 NUP54Q7Z3B4 507 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 SLC39A11Q8N1S5 342 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 POM121L12Q8N7R1 296 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 CHPT1Q8WUD6 406 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 GATAD1Q8WUU5 269 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 EVI5LQ96CN4 794 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 PDLIM5Q96HC4 596 aaKnown RBP2.98□□□□□ -1.93
MDM2-227ENST00000540709 LPAR4Q99677 370 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 RPP25Q9BUL9 199 aaKnown RBP2.98□□□□□ -1.93
MDM2-227ENST00000540709 PRRG4Q9BZD6 226 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 TLE6Q9H808 572 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 TBC1D22BQ9NU19 505 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 NDE1Q9NXR1 346 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 TBC1D29Q9UFV1 150 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 SLC24A2Q9UI40 661 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 PCDHGB4Q9UN71 923 aa2.98□□□□□ -1.93
MDM2-227ENST00000540709 RSF1Q96T23 1441 aaPredicted RBP2.98□□□□□ -1.93
MDM2-227ENST00000540709 ZNF318Q5VUA4 2279 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 ENTPD3O75355 529 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 POP4O95707 220 aaKnown RBP2.97□□□□□ -1.93
MDM2-227ENST00000540709 IGHV2-70P01814 119 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 VTNP04004 478 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 ITIH1P19827 911 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 CDC25CP30307 473 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 HOXD13P35453 343 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 SOX3P41225 446 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 LIMK2P53671 638 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 EIF5P55010 431 aaKnown RBP2.97□□□□□ -1.93
MDM2-227ENST00000540709 MAT1AQ00266 395 aaKnown RBP2.97□□□□□ -1.93
MDM2-227ENST00000540709 MYL7Q01449 175 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 ZFP36L1Q07352 338 aaKnown RBP2.97□□□□□ -1.93
MDM2-227ENST00000540709 LY6DQ14210 128 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 EXT1Q16394 746 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 HYIQ5T013 277 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 FAM205BPQ63HN1 556 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 FRRS1Q6ZNA5 592 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 CATSPERDQ86XM0 798 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 KLHDC1Q8N7A1 406 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 OR7A2PQ8NGA2 310 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 OR4K1Q8NGD4 311 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 ZPLD1Q8TCW7 415 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 SLC22A18Q96BI1 424 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 CNRIP1Q96F85 164 aaPredicted RBP2.97□□□□□ -1.93
MDM2-227ENST00000540709 RSRC1Q96IZ7 334 aaKnown RBP2.97□□□□□ -1.93
MDM2-227ENST00000540709 MYNNQ9NPC7 610 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 BLOC1S4Q9NUP1 217 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 GIMAP4Q9NUV9 329 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 PRR34Q9NV39 138 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 MRPL15Q9P015 296 aaKnown RBP2.97□□□□□ -1.93
MDM2-227ENST00000540709 RNF150Q9ULK6 438 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 ABT1Q9ULW3 272 aaKnown RBP2.97□□□□□ -1.93
MDM2-227ENST00000540709 PPIEQ9UNP9 301 aaKnown RBP2.97□□□□□ -1.93
MDM2-227ENST00000540709 CHKBQ9Y259 395 aa2.97□□□□□ -1.93
MDM2-227ENST00000540709 WBP11Q9Y2W2 641 aaKnown RBP2.97□□□□□ -1.93
MDM2-227ENST00000540709 TDRD15B5MCY1 1934 aaKnown RBP2.96□□□□□ -1.94
MDM2-227ENST00000540709 NEMP2A6NFY4 417 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 ACOD1A6NK06 481 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 TFECO14948 347 aaPredicted RBP2.96□□□□□ -1.94
MDM2-227ENST00000540709 TOMM70O94826 608 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 IRF2P14316 349 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 EIF2DP41214 584 aaKnown RBP2.96□□□□□ -1.94
MDM2-227ENST00000540709 MTHFRP42898 656 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 KLC1Q07866 573 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 EPS8Q12929 822 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 MAPRE1Q15691 268 aaKnown RBP2.96□□□□□ -1.94
MDM2-227ENST00000540709 ZER1Q7Z7L7 766 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 ZNF584Q8IVC4 421 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 ABHD12Q8N2K0 398 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 MINDY1Q8N5J2 469 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 CFAP61Q8NHU2 1237 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 SECISBP2LQ93073 1101 aaKnown RBP2.96□□□□□ -1.94
MDM2-227ENST00000540709 ZNF622Q969S3 477 aaKnown RBP eCLIP2.96□□□□□ -1.94
MDM2-227ENST00000540709 C4orf45Q96LM5 186 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 ZNF577Q9BSK1 485 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 ZMYND12Q9H0C1 365 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 GPN1Q9HCN4 374 aaPredicted RBP2.96□□□□□ -1.94
MDM2-227ENST00000540709 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.96□□□□□ -1.94
MDM2-227ENST00000540709 BAIAP2L1Q9UHR4 511 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 CPSF3Q9UKF6 684 aaKnown RBP2.96□□□□□ -1.94
MDM2-227ENST00000540709 TMEM5Q9Y2B1 443 aa2.96□□□□□ -1.94
MDM2-227ENST00000540709 ZNF510Q9Y2H8 683 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms