RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.63□□□□□ -1.03
LMO3-222ENST00000540445 SMPDL3AQ92484 453 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 INPP5DQ92835 1189 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 COL26A1Q96A83 441 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 CAPZA3Q96KX2 299 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 PKP4Q99569 1192 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 NUDT9Q9BW91 350 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 YIPF2Q9BWQ6 316 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 MFRPQ9BY79 579 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 DDX47Q9H0S4 455 aaKnown RBP8.63□□□□□ -1.03
LMO3-222ENST00000540445 ATP13A2Q9NQ11 1180 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 SLAMF7Q9NQ25 335 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 PPANQ9NQ55 473 aaKnown RBP8.63□□□□□ -1.03
LMO3-222ENST00000540445 P4HTMQ9NXG6 502 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 UTP6Q9NYH9 597 aaKnown RBP8.63□□□□□ -1.03
LMO3-222ENST00000540445 STOX2Q9P2F5 926 aaPredicted RBP8.63□□□□□ -1.03
LMO3-222ENST00000540445 MAP10Q9P2G4 905 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 CDC23Q9UJX2 597 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 FBXO5Q9UKT4 447 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 PCDHGB7Q9Y5F8 929 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 COMMD10Q9Y6G5 202 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 MAU2Q9Y6X3 613 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 FAM169AQ9Y6X4 670 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 LRRK2Q5S007 2527 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 NAV2Q8IVL1 2488 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 MAST4O15021 2626 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 UTP20O75691 2785 aaKnown RBP8.62□□□□□ -1.03
LMO3-222ENST00000540445 LOC105369274A0A096LPK9 316 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 LOC102723532A0A0G2JNH3 316 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 A0A1W2PPV9 198 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 ARHGEF33A8MVX0 844 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 AGPSO00116 658 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 KLHL41O60662 606 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 VPS4BO75351 444 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 ALBP02768 609 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 MPC1LP0DKB6 136 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 HSD17B2P37059 387 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 PNLIPRP1P54315 467 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 YBX1P67809 324 aaKnown RBP8.62□□□□□ -1.03
LMO3-222ENST00000540445 MPP1Q00013 466 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 OCA2Q04671 838 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 DHX9Q08211 1270 aaKnown RBP8.62□□□□□ -1.03
LMO3-222ENST00000540445 PTK6Q13882 451 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 GBX1Q14549 363 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 ARHGAP19Q14CB8 494 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.62□□□□□ -1.03
LMO3-222ENST00000540445 DCAF10Q5QP82 559 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 HP1BP3Q5SSJ5 553 aaPredicted RBP8.62□□□□□ -1.03
LMO3-222ENST00000540445 RNASEH2BQ5TBB1 312 aaKnown RBP8.62□□□□□ -1.03
LMO3-222ENST00000540445 FBXO42Q6P3S6 717 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 ZNF549Q6P9A3 640 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 NEK10Q6ZWH5 1172 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 UBE2R2Q712K3 238 aaPredicted RBP8.62□□□□□ -1.03
LMO3-222ENST00000540445 ADCK2Q7Z695 626 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 MRGPREQ86SM8 312 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 KLHL7Q8IXQ5 586 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 OR4N4Q8N0Y3 316 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 CPT1CQ8TCG5 803 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 KCNJ9Q92806 393 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 RERGQ96A58 199 aaPredicted RBP8.62□□□□□ -1.03
LMO3-222ENST00000540445 CABS1Q96KC9 395 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 GPR21Q99679 349 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 SLC30A3Q99726 388 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 ZFYVE21Q9BQ24 234 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 FAM167BQ9BTA0 163 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 SOX17Q9H6I2 414 aaPredicted RBP8.62□□□□□ -1.03
LMO3-222ENST00000540445 ZNF304Q9HCX3 659 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 KLHL42Q9P2K6 505 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 VPS4AQ9UN37 437 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 DHRS7Q9Y394 339 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 ICE1Q9Y2F5 2266 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 HIVEP3Q5T1R4 2406 aa8.62□□□□□ -1.03
LMO3-222ENST00000540445 FITM1A5D6W6 292 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 H0YGG7 62 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 MYO1CO00159 1063 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 MASP2O00187 686 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 SMAPO00193 183 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 DNALI1O14645 258 aaPredicted RBP8.61□□□□□ -1.03
LMO3-222ENST00000540445 NRP2O60462 931 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 CNOT3O75175 753 aaKnown RBP8.61□□□□□ -1.03
LMO3-222ENST00000540445 BANF1O75531 89 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 CCNDBP1O95273 360 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 TTC4O95801 387 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 SLC16A8O95907 504 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 ALPPP05187 535 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 ENO3P13929 434 aaPredicted RBP8.61□□□□□ -1.03
LMO3-222ENST00000540445 PGAM1P18669 254 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 ITGAXP20702 1163 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 MMP11P24347 488 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 ITGA3P26006 1051 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 SKIV2L2P42285 1042 aaKnown RBP8.61□□□□□ -1.03
LMO3-222ENST00000540445 PAFAH1B1P43034 410 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 MAGEA3P43357 314 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 GCGRP47871 477 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 CARSP49589 748 aaKnown RBP8.61□□□□□ -1.03
LMO3-222ENST00000540445 RGS4P49798 205 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 ARF3P61204 181 aaPredicted RBP8.61□□□□□ -1.03
LMO3-222ENST00000540445 GNG11P61952 73 aa8.61□□□□□ -1.03
LMO3-222ENST00000540445 PRDX1Q06830 199 aaKnown RBP8.61□□□□□ -1.03
LMO3-222ENST00000540445 UBAP2LQ14157 1087 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms