RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 CACUL1Q86Y37 369 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 PSD4Q8NDX1 1056 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 OR4K1Q8NGD4 311 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 PYURFQ96I23 114 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 RAD21L1Q9H4I0 556 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 ELAC1Q9H777 363 aaKnown RBP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 KCTD5Q9NXV2 234 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 SELENONQ9NZV5 590 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 LSM7Q9UK45 103 aaKnown RBP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 ITM2BQ9Y287 266 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 SAMHD1Q9Y3Z3 626 aaKnown RBP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 ABLIM3O94929 683 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 ETHE1O95571 254 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 NPPAP01160 153 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 MAGP20916 626 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 AOAHP28039 575 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 DAPP51397 102 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 NUDT6P53370 316 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 GP2P55259 537 aaKnown RBP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 NCS1P62166 190 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 EMX1Q04741 257 aaPredicted RBP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 MAD2L1Q13257 205 aaPredicted RBP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 CARTPTQ16568 116 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 SYT16Q17RD7 645 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 ACBD5Q5T8D3 534 aaPredicted RBP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 GRAMD4Q6IC98 578 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 AHSA2Q719I0 299 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 TRIM46Q7Z4K8 759 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 HORMAD1Q86X24 394 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 SAMD11Q96NU1 681 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 LINC00597Q9H2U6 94 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 SUV39H2Q9H5I1 410 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 IL21Q9HBE4 155 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 THG1LQ9NWX6 298 aaKnown RBP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 TRIM64A6NGJ6 449 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 VIPP01282 170 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 FUT4P22083 530 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 IDUAP35475 653 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 CYP4F2P78329 520 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 NKX3-2P78367 333 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 HTRA3P83110 453 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 CDK5R2Q13319 367 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 GPR149Q86SP6 731 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 CENPSQ8N2Z9 138 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 ZNF540Q8NDQ6 660 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 OR5AK3PQ8NH89 298 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 USP7Q93009 1102 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 NTMT1Q9BV86 223 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 RUBCNLQ9H714 662 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 TRNAU1APQ9NX07 287 aaKnown RBP13.25□□□□□ -0.29
BNIP3-202ENST00000540159 SIRT5Q9NXA8 310 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 ZDHHC3Q9NYG2 299 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 GNG14A0A1W2PPG7 69 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 EVPLLA8MZ36 301 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 SEC14L2O76054 403 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 C1SP09871 688 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 PPP3CCP48454 512 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 FXNQ16595 210 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 UAP1L1Q3KQV9 507 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 FRG2Q64ET8 278 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 MACC1Q6ZN28 852 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 MRPS31Q92665 395 aaKnown RBP13.25□□□□□ -0.29
BNIP3-202ENST00000540159 REXO5Q96IC2 774 aaKnown RBP13.25□□□□□ -0.29
BNIP3-202ENST00000540159 FRG2BQ96QU4 278 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 ACSL6Q9UKU0 697 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 PSME2Q9UL46 239 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 TESMINQ9Y4I5 508 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 GMPPBQ9Y5P6 360 aa13.25□□□□□ -0.29
BNIP3-202ENST00000540159 DYTNA2CJ06 578 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 SCELO95171 688 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 CPNE6O95741 557 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 FUCA1P04066 466 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 SOD2P04179 222 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 OR56A5P0C7T3 313 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 CBX2Q14781 532 aaPredicted RBP13.24□□□□□ -0.29
BNIP3-202ENST00000540159 SKIV2LQ15477 1246 aaKnown RBP13.24□□□□□ -0.29
BNIP3-202ENST00000540159 UGT8Q16880 541 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 EGFLAMQ63HQ2 1017 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 CPZQ66K79 652 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 TPRG1Q6ZUI0 275 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 USP45Q70EL2 814 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 SLCO6A1Q86UG4 719 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 ZCCHC7Q8N3Z6 543 aaKnown RBP13.24□□□□□ -0.29
BNIP3-202ENST00000540159 OR5K1Q8NHB7 308 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 TCEAL4Q96EI5 215 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 HSH2DQ96JZ2 352 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 KCNC2Q96PR1 638 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 TRPS1Q9UHF7 1281 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 SNX6Q9UNH7 406 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 COQ6Q9Y2Z9 468 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 HCFC2Q9Y5Z7 792 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 TMEM247A6NEH6 219 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 MAGEB17A8MXT2 336 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 LCKP06239 509 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 ACRP10323 421 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 PDHA2P29803 388 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 CTSCP53634 463 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 CLDN8P56748 225 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 SNRPD1P62314 119 aaKnown RBP13.24□□□□□ -0.29
BNIP3-202ENST00000540159 DNASE1L3Q13609 305 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms