RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 TMED1Q13445 227 aa11.18□□□□□ -0.62
C11orf54-214ENST00000540113 GTF2H3Q13889 308 aa11.18□□□□□ -0.62
C11orf54-214ENST00000540113 GBX1Q14549 363 aa11.18□□□□□ -0.62
C11orf54-214ENST00000540113 LAIR2Q6ISS4 152 aa11.18□□□□□ -0.62
C11orf54-214ENST00000540113 NOXRED1Q6NXP6 359 aa11.18□□□□□ -0.62
C11orf54-214ENST00000540113 ZCCHC8Q6NZY4 707 aaKnown RBP11.18□□□□□ -0.62
C11orf54-214ENST00000540113 THAP5Q7Z6K1 395 aa11.18□□□□□ -0.62
C11orf54-214ENST00000540113 CALHM3Q86XJ0 350 aa11.18□□□□□ -0.62
C11orf54-214ENST00000540113 PLPP6Q8IY26 295 aa11.18□□□□□ -0.62
C11orf54-214ENST00000540113 C8orf59Q8N0T1 100 aaPredicted RBP11.18□□□□□ -0.62
C11orf54-214ENST00000540113 TMEM132CQ8N3T6 1108 aa11.18□□□□□ -0.62
C11orf54-214ENST00000540113 SNX19Q92543 992 aa11.18□□□□□ -0.62
C11orf54-214ENST00000540113 ZNF641Q96N77 438 aaPredicted RBP11.18□□□□□ -0.62
C11orf54-214ENST00000540113 RIOK2Q9BVS4 552 aaKnown RBP11.18□□□□□ -0.62
C11orf54-214ENST00000540113 LHPPQ9H008 270 aa11.18□□□□□ -0.62
C11orf54-214ENST00000540113 PCDH12Q9NPG4 1184 aa11.18□□□□□ -0.62
C11orf54-214ENST00000540113 ABCG2Q9UNQ0 655 aa11.18□□□□□ -0.62
C11orf54-214ENST00000540113 A0A096LPI6 279 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 PABPN1LA6NDY0 278 aaKnown RBP11.17□□□□□ -0.62
C11orf54-214ENST00000540113 C16orf96A6NNT2 1141 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 FADS2P1A8MWK0 482 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 MYO1GB0I1T2 1018 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 SGTAO43765 313 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 LEFTY1O75610 366 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 HTR1AP08908 422 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 TFPTP0C1Z6 253 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 TYRP14679 529 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ZNF182P17025 639 aaPredicted RBP11.17□□□□□ -0.62
C11orf54-214ENST00000540113 CRHBPP24387 322 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 RANBP1P43487 201 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 BDKRB1P46663 353 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 CD47Q08722 323 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ARSIQ5FYB1 569 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 XKR6Q5GH73 641 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.17□□□□□ -0.62
C11orf54-214ENST00000540113 FRG2Q64ET8 278 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 XAF1Q6GPH4 301 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ELMSAN1Q6PJG2 1045 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 GDPD4Q6W3E5 623 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ZNF621Q6ZSS3 439 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 LRRC70Q7Z2Q7 622 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 VTCN1Q7Z7D3 282 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ZC3H7AQ8IWR0 971 aaKnown RBP11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ALDH16A1Q8IZ83 802 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 CHDHQ8NE62 594 aaPredicted RBP11.17□□□□□ -0.62
C11orf54-214ENST00000540113 CNIH3Q8TBE1 160 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 IRF7Q92985 503 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ABTB1Q969K4 478 aaPredicted RBP11.17□□□□□ -0.62
C11orf54-214ENST00000540113 FRG2BQ96QU4 278 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 DGCR6LQ9BY27 220 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 REXO4Q9GZR2 422 aaKnown RBP11.17□□□□□ -0.62
C11orf54-214ENST00000540113 DNAJC11Q9NVH1 559 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 THG1LQ9NWX6 298 aaKnown RBP11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ASIC5Q9NY37 505 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 CXXC1Q9P0U4 656 aaPredicted RBP11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ITM2BQ9Y287 266 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 BTBD3Q9Y2F9 522 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 FAM220BPB1ANY3 271 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 FPGTO14772 594 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 NUAK1O60285 661 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ERN1O75460 977 aaKnown RBP11.17□□□□□ -0.62
C11orf54-214ENST00000540113 HOXB9P17482 250 aaPredicted RBP11.17□□□□□ -0.62
C11orf54-214ENST00000540113 FSHRP23945 695 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 DCKP27707 260 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 NRIP1P48552 1158 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 CTSCP53634 463 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 TSTA3Q13630 321 aaPredicted RBP11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ZNF77Q15935 545 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 UGT8Q16880 541 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 LY6G5CQ5SRR4 150 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 LRIF1Q5T3J3 769 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ATG9BQ674R7 924 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 KLHL35Q6PF15 583 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ZNF773Q6PK81 442 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 RNF165Q6ZSG1 346 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 CEP68Q76N32 757 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 SPRED2Q7Z698 418 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 SYT12Q8IV01 421 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 CHCHD4Q8N4Q1 142 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 AADATQ8N5Z0 425 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ZNF555Q8NEP9 628 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 CMTM7Q96FZ5 175 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ZSWIM3Q96MP5 696 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 PANX1Q96RD7 426 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 SH3GL1Q99961 368 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 IL23AQ9NPF7 189 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 SPHK2Q9NRA0 654 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 TDP1Q9NUW8 608 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 RHBDL2Q9NX52 303 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 KLHL42Q9P2K6 505 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 FAF1Q9UNN5 650 aaPredicted RBP11.17□□□□□ -0.62
C11orf54-214ENST00000540113 CHD7Q9P2D1 2997 aa11.17□□□□□ -0.62
C11orf54-214ENST00000540113 ARHGEF33A8MVX0 844 aa11.16□□□□□ -0.62
C11orf54-214ENST00000540113 WASH3PC4AMC7 463 aa11.16□□□□□ -0.62
C11orf54-214ENST00000540113 GFYI3L273 518 aa11.16□□□□□ -0.62
C11orf54-214ENST00000540113 TSPAN6O43657 245 aa11.16□□□□□ -0.62
C11orf54-214ENST00000540113 XPNPEP2O43895 674 aa11.16□□□□□ -0.62
C11orf54-214ENST00000540113 ETHE1O95571 254 aa11.16□□□□□ -0.62
C11orf54-214ENST00000540113 C8GP07360 202 aa11.16□□□□□ -0.62
C11orf54-214ENST00000540113 RHOP08100 348 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms