RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ROPN1Q9HAT0 212 aaPredicted RBP12.28□□□□□ -0.44
DDX55-206ENST00000539934 PIGVQ9NUD9 493 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 SMOXQ9NWM0 555 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 GPN3Q9UHW5 284 aaPredicted RBP12.28□□□□□ -0.44
DDX55-206ENST00000539934 ACSL5Q9ULC5 683 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 MYO16Q9Y6X6 1858 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 H3BMQ9 156 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 TFECO14948 347 aaPredicted RBP12.27□□□□□ -0.44
DDX55-206ENST00000539934 GPX5O75715 221 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 OAZ2O95190 189 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 ATE1O95260 518 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 NDST3O95803 873 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 SRGAP2BP0DMP2 458 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 NBL1P41271 181 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 GNPDA1P46926 289 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 YAP1P46937 504 aaKnown RBP12.27□□□□□ -0.44
DDX55-206ENST00000539934 NRLP54845 237 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 PRKD1Q15139 912 aaPredicted RBP12.27□□□□□ -0.44
DDX55-206ENST00000539934 FNDC1Q4ZHG4 1894 aaPredicted RBP12.27□□□□□ -0.44
DDX55-206ENST00000539934 USP39Q53GS9 565 aaKnown RBP12.27□□□□□ -0.44
DDX55-206ENST00000539934 ATAD3CQ5T2N8 411 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 SLC25A24Q6NUK1 477 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 IL17RCQ8NAC3 791 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 MAGEE2Q8TD90 523 aaPredicted RBP12.27□□□□□ -0.44
DDX55-206ENST00000539934 EDEM1Q92611 657 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 SNAPC3Q92966 411 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 LRRC39Q96DD0 335 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 ADAD1Q96M93 576 aaKnown RBP12.27□□□□□ -0.44
DDX55-206ENST00000539934 PELOQ9BRX2 385 aaKnown RBP12.27□□□□□ -0.44
DDX55-206ENST00000539934 TMPRSS4Q9NRS4 437 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 PLCXD1Q9NUJ7 323 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 DDIT4Q9NX09 232 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 ZIM2Q9NZV7 527 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 PPM1HQ9ULR3 514 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 SORCS3Q9UPU3 1222 aa12.27□□□□□ -0.44
DDX55-206ENST00000539934 ZNF197O14709 1029 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 IPO13O94829 963 aaKnown RBP12.27□□□□□ -0.45
DDX55-206ENST00000539934 MBP02144 154 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 YES1P07947 543 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 FBP1P09467 338 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 OR4Q2P0C623 313 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 CYP2A7P20853 494 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 MAT2AP31153 395 aaKnown RBP12.27□□□□□ -0.45
DDX55-206ENST00000539934 CCR1P32246 355 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 TIE1P35590 1138 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 CCR9P51686 369 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 BNIP3Q12983 259 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 HIF1AQ16665 826 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 SLC39A12Q504Y0 691 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 TYW3Q6IPR3 259 aaKnown RBP12.27□□□□□ -0.45
DDX55-206ENST00000539934 ZFP1Q6P2D0 407 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 GALNT18Q6P9A2 607 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 GPAT4Q86UL3 456 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 LRRTM4Q86VH4 590 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 TPRA1Q86W33 373 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 PHC2Q8IXK0 858 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 TIGD4Q8IY51 512 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 ATG16L2Q8NAA4 619 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 COLGALT1Q8NBJ5 622 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 TP53I13Q8NBR0 393 aaPredicted RBP12.27□□□□□ -0.45
DDX55-206ENST00000539934 GLB1L3Q8NCI6 653 aaPredicted RBP12.27□□□□□ -0.45
DDX55-206ENST00000539934 DENND6BQ8NEG7 585 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 ST8SIA4Q92187 359 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 VRK1Q99986 396 aaPredicted RBP12.27□□□□□ -0.45
DDX55-206ENST00000539934 SARS2Q9NP81 518 aaKnown RBP12.27□□□□□ -0.45
DDX55-206ENST00000539934 PAK5Q9P286 719 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 ZFP69BQ9UJL9 534 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 ST14Q9Y5Y6 855 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 VWA8A3KMH1 1905 aa12.27□□□□□ -0.45
DDX55-206ENST00000539934 BCLAF3A2AJT9 711 aaKnown RBP12.26□□□□□ -0.45
DDX55-206ENST00000539934 TRABD2BA6NFA1 517 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 TTLL8A6PVC2 850 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 HACD1B0YJ81 288 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 H7C0S8 307 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 SGCEO43556 437 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 AKAP8O43823 692 aaKnown RBP12.26□□□□□ -0.45
DDX55-206ENST00000539934 TSPAN3O60637 253 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 KERAO60938 352 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 LILRB5O75023 590 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 IFNA4P05014 189 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 RBP1P09455 135 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 GPX4P36969 197 aaPredicted RBP12.26□□□□□ -0.45
DDX55-206ENST00000539934 DDOSTP39656 456 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 PPP3CCP48454 512 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 GNA12Q03113 381 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 PDIA2Q13087 525 aaKnown RBP12.26□□□□□ -0.45
DDX55-206ENST00000539934 PEX6Q13608 980 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 ALKBH1Q13686 389 aaKnown RBP12.26□□□□□ -0.45
DDX55-206ENST00000539934 ZNF169Q14929 603 aaPredicted RBP12.26□□□□□ -0.45
DDX55-206ENST00000539934 AASDHQ4L235 1098 aaPredicted RBP12.26□□□□□ -0.45
DDX55-206ENST00000539934 OGFRL1Q5TC84 451 aaPredicted RBP12.26□□□□□ -0.45
DDX55-206ENST00000539934 ANKRD22Q5VYY1 191 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 NCBP2-AS2Q69YL0 99 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 ELP2Q6IA86 826 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 TPGS1Q6ZTW0 290 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 ZNF438Q7Z4V0 828 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 AMIGO2Q86SJ2 522 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 HIPK4Q8NE63 616 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 GATAD2BQ8WXI9 593 aa12.26□□□□□ -0.45
DDX55-206ENST00000539934 AUTS2Q8WXX7 1259 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms