RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 SEC22BO75396 215 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 MLYCDO95822 493 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 CSF2P04141 144 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 CSF2RAP15509 400 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 PRKACAP17612 351 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 ERP29P30040 261 aaKnown RBP11.6□□□□□ -0.55
NEK6-212ENST00000539416 ADRA1BP35368 520 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 NDUFV1P49821 464 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 GZMKP49863 264 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 LIMK1P53667 647 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 DAB2P98082 770 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 RAD51Q06609 339 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 GRIK2Q13002 908 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 PRKG2Q13237 762 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 CPZQ66K79 652 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.6□□□□□ -0.553e-9■■■■■ 29.7
NEK6-212ENST00000539416 SYVN1Q86TM6 617 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 FNDC5Q8NAU1 212 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 SETD6Q8TBK2 473 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 TSPAN17Q96FV3 270 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 CCDC115Q96NT0 180 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 APOL4Q9BPW4 351 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 COPS4Q9BT78 406 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 THUMPD3Q9BV44 507 aaKnown RBP11.6□□□□□ -0.55
NEK6-212ENST00000539416 C2orf49Q9BVC5 232 aaPredicted RBP11.6□□□□□ -0.55
NEK6-212ENST00000539416 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.6□□□□□ -0.551e-6■■□□□ 13.5
NEK6-212ENST00000539416 ACTL8Q9H568 366 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 GLTPQ9NZD2 209 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 ZNF225Q9UK10 706 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 NDRG4Q9ULP0 352 aaKnown RBP11.6□□□□□ -0.55
NEK6-212ENST00000539416 TRAPPC4Q9Y296 219 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 CRYL1Q9Y2S2 319 aa11.6□□□□□ -0.55
NEK6-212ENST00000539416 FNDC1Q4ZHG4 1894 aaPredicted RBP11.6□□□□□ -0.55
NEK6-212ENST00000539416 CASTOR2A6NHX0 329 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 E5RI56 91 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 ATP6V1G2-DDX39BF2Z307 99 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 ARHGEF9O43307 516 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 VPS4BO75351 444 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 NPPAP01160 153 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 ADORA3P0DMS8 318 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 ZNF250P15622 560 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 MAPK12P53778 367 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 HOXC5Q00444 222 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 YWHAHQ04917 246 aaPredicted RBP11.59□□□□□ -0.55
NEK6-212ENST00000539416 HYAL2Q12891 473 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 GTF2H3Q13889 308 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 C6orf136Q5SQH8 315 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 LAMTOR1Q6IAA8 161 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 ZNF280BQ86YH2 543 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 UBE2J2Q8N2K1 259 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 TMEM86AQ8N2M4 240 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 SH3KBP1Q96B97 665 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 COQ8BQ96D53 544 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 SENP8Q96LD8 212 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 NPY6RQ99463 290 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 TMEM175Q9BSA9 504 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 ZIM2Q9NZV7 527 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 EIF3KQ9UBQ5 218 aaKnown RBP11.59□□□□□ -0.55
NEK6-212ENST00000539416 VPS4AQ9UN37 437 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 MRPL42Q9Y6G3 142 aaKnown RBP11.59□□□□□ -0.55
NEK6-212ENST00000539416 HSPE1-MOB4S4R3N1 261 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 OR51F1A6NGY5 319 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 KIAA0513O60268 411 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 OR2B3O76000 313 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 DIRAS1O95057 198 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 PDGFAP04085 211 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 PAMP19021 973 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 IL32P24001 234 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 DNAJB2P25686 324 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 MRPL19P49406 292 aaKnown RBP11.59□□□□□ -0.55
NEK6-212ENST00000539416 ERVK-8P63133 956 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 ADIGQ0VDE8 80 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 SEMA3BQ13214 749 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 PPIGQ13427 754 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■■□□□ 13.2
NEK6-212ENST00000539416 PWP1Q13610 501 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 ZNF79Q15937 498 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 C5orf22Q49AR2 442 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 XKR7Q5GH72 579 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 RAB44Q7Z6P3 723 aaPredicted RBP11.59□□□□□ -0.55
NEK6-212ENST00000539416 PLCZ1Q86YW0 608 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 PHACTR4Q8IZ21 702 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 CRYBG2Q8N1P7 616 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 C3orf58Q8NDZ4 430 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 OR10T2Q8NGX3 314 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 NETO1Q8TDF5 533 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 IPCEF1Q8WWN9 437 aaPredicted RBP11.59□□□□□ -0.55
NEK6-212ENST00000539416 NCLNQ969V3 563 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 FAM193BQ96PV7 902 aaPredicted RBP11.59□□□□□ -0.55
NEK6-212ENST00000539416 PAAF1Q9BRP4 392 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 MARCH4Q9P2E8 410 aaPredicted RBP11.59□□□□□ -0.55
NEK6-212ENST00000539416 SLC23A1Q9UHI7 598 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 PCDHB5Q9Y5E4 795 aa11.59□□□□□ -0.55
NEK6-212ENST00000539416 B4DXG7 233 aa11.58□□□□□ -0.56
NEK6-212ENST00000539416 M0QZQ0 153 aa11.58□□□□□ -0.56
NEK6-212ENST00000539416 GABRDO14764 452 aa11.58□□□□□ -0.56
NEK6-212ENST00000539416 NCAM2O15394 837 aa11.58□□□□□ -0.56
NEK6-212ENST00000539416 PDPK1O15530 556 aa11.58□□□□□ -0.56
NEK6-212ENST00000539416 EPN2O95208 641 aa11.58□□□□□ -0.56
NEK6-212ENST00000539416 SERPINA1P01009 418 aa11.58□□□□□ -0.56
NEK6-212ENST00000539416 IGFBP6P24592 240 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms