RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 ICE2Q659A1 982 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 METTL2BQ6P1Q9 378 aaKnown RBP22.66■■□□□ 1.22
TMEM260-202ENST00000538838 SPESP1Q6UW49 350 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 OR2L3Q8NG85 312 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 PPP1R14CQ8TAE6 165 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 DYDC1Q8WWB3 177 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 NEIL2Q969S2 332 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 TGM7Q96PF1 710 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 HAUS8Q9BT25 410 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 PCBD2Q9H0N5 130 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 TMEM9Q9P0T7 183 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 DYRK1BQ9Y463 629 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 HEATR5BQ9P2D3 2071 aa22.66■■□□□ 1.22
TMEM260-202ENST00000538838 EPB42P16452 691 aa22.65■■□□□ 1.22
TMEM260-202ENST00000538838 CCDC157Q569K6 752 aa22.65■■□□□ 1.22
TMEM260-202ENST00000538838 FAM92BQ6ZTR7 304 aa22.65■■□□□ 1.22
TMEM260-202ENST00000538838 FRMD7Q6ZUT3 714 aa22.65■■□□□ 1.22
TMEM260-202ENST00000538838 CUEDC1Q9NWM3 386 aaPredicted RBP22.65■■□□□ 1.22
TMEM260-202ENST00000538838 E7EQ34 232 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 LSSP48449 732 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 CLCQ05315 142 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 TRIP6Q15654 476 aaKnown RBP22.64■■□□□ 1.22
TMEM260-202ENST00000538838 SLC5A12Q1EHB4 618 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 KIAA1614Q5VZ46 1190 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 TMPRSS9Q7Z410 1059 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 C17orf64Q86WR6 236 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 OR6Y1Q8NGX8 325 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 TRPC4APQ8TEL6 797 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 RAB33BQ9H082 229 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 NOL11Q9H8H0 719 aaKnown RBP22.64■■□□□ 1.22
TMEM260-202ENST00000538838 IPPKQ9H8X2 491 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 SLC6A20Q9NP91 592 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 TOR4AQ9NXH8 423 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 EPHA6Q9UF33 1036 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 KLHL3Q9UH77 587 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 KLHL20Q9Y2M5 609 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 KCNE2Q9Y6J6 123 aa22.64■■□□□ 1.22
TMEM260-202ENST00000538838 MN1Q10571 1320 aaPredicted RBP22.64■■□□□ 1.22
TMEM260-202ENST00000538838 SPEGQ15772 3267 aa22.64■■□□□ 1.21
TMEM260-202ENST00000538838 ADAMTS20P59510 1910 aa22.64■■□□□ 1.21
TMEM260-202ENST00000538838 PPP6CO00743 305 aa22.64■■□□□ 1.21
TMEM260-202ENST00000538838 KIF1CO43896 1103 aaKnown RBP22.64■■□□□ 1.21
TMEM260-202ENST00000538838 SERPINE1P05121 402 aa22.64■■□□□ 1.21
TMEM260-202ENST00000538838 CDH1P12830 882 aa22.64■■□□□ 1.21
TMEM260-202ENST00000538838 PIK3CGP48736 1102 aa22.64■■□□□ 1.21
TMEM260-202ENST00000538838 PRDX1Q06830 199 aaKnown RBP22.64■■□□□ 1.21
TMEM260-202ENST00000538838 RBBP7Q16576 425 aa22.64■■□□□ 1.21
TMEM260-202ENST00000538838 WDR74Q6RFH5 385 aaPredicted RBP22.64■■□□□ 1.21
TMEM260-202ENST00000538838 TMPRSS11BQ86T26 416 aa22.64■■□□□ 1.21
TMEM260-202ENST00000538838 SLC5A11Q8WWX8 675 aa22.64■■□□□ 1.21
TMEM260-202ENST00000538838 MRPS30Q9NP92 439 aaKnown RBP22.64■■□□□ 1.21
TMEM260-202ENST00000538838 PCNX2A6NKB5 2137 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 IGKV1-8A0A0C4DH67 115 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 OR7A17O14581 309 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 H2AFYO75367 372 aaKnown RBP22.63■■□□□ 1.21
TMEM260-202ENST00000538838 RFPL3O75679 317 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 CCNDBP1O95273 360 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 CPNE6O95741 557 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 HOXB3P14651 431 aaPredicted RBP22.63■■□□□ 1.21
TMEM260-202ENST00000538838 PVRP15151 417 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 MPSTP25325 297 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 CMPK1P30085 196 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 ARRB2P32121 409 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 CATSPEREQ5SY80 951 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 GLRX5Q86SX6 157 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 PLXDC1Q8IUK5 500 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 DCBLD1Q8N8Z6 715 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 OR52B6Q8NGF0 335 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 ZDHHC12Q96GR4 267 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 GFM1Q96RP9 751 aaKnown RBP22.63■■□□□ 1.21
TMEM260-202ENST00000538838 MAP3K3Q99759 626 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 KLHL25Q9H0H3 589 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 GPRC5BQ9NZH0 403 aa22.63■■□□□ 1.21
TMEM260-202ENST00000538838 A0A0J9YY10 115 aa22.62■■□□□ 1.21
TMEM260-202ENST00000538838 A0A1B0GTL3 188 aa22.62■■□□□ 1.21
TMEM260-202ENST00000538838 NTN3O00634 580 aaPredicted RBP22.62■■□□□ 1.21
TMEM260-202ENST00000538838 TM4SF5O14894 197 aa22.62■■□□□ 1.21
TMEM260-202ENST00000538838 PRAMEF4O60810 478 aa22.62■■□□□ 1.21
TMEM260-202ENST00000538838 C9P02748 559 aa22.62■■□□□ 1.21
TMEM260-202ENST00000538838 GNAZP19086 355 aa22.62■■□□□ 1.21
TMEM260-202ENST00000538838 MAGP20916 626 aa22.62■■□□□ 1.21
TMEM260-202ENST00000538838 CDH3P22223 829 aa22.62■■□□□ 1.21
TMEM260-202ENST00000538838 LCP2Q13094 533 aa22.62■■□□□ 1.21
TMEM260-202ENST00000538838 SQSTM1Q13501 440 aa22.62■■□□□ 1.21
TMEM260-202ENST00000538838 RCN2Q14257 317 aa22.62■■□□□ 1.21
TMEM260-202ENST00000538838 PRAMEF9Q5VWM5 478 aa22.62■■□□□ 1.21
TMEM260-202ENST00000538838 CLGNO14967 610 aa22.61■■□□□ 1.21
TMEM260-202ENST00000538838 NRP2O60462 931 aa22.61■■□□□ 1.21
TMEM260-202ENST00000538838 NPHS1O60500 1241 aa22.61■■□□□ 1.21
TMEM260-202ENST00000538838 KATNA1O75449 491 aa22.61■■□□□ 1.21
TMEM260-202ENST00000538838 ARL1P40616 181 aaPredicted RBP22.61■■□□□ 1.21
TMEM260-202ENST00000538838 GYS2P54840 703 aa22.61■■□□□ 1.21
TMEM260-202ENST00000538838 ABATP80404 500 aa22.61■■□□□ 1.21
TMEM260-202ENST00000538838 BST1Q10588 318 aa22.61■■□□□ 1.21
TMEM260-202ENST00000538838 TRAF3Q13114 568 aa22.61■■□□□ 1.21
TMEM260-202ENST00000538838 SNAP47Q5SQN1 464 aa22.61■■□□□ 1.21
TMEM260-202ENST00000538838 ATG14Q6ZNE5 492 aa22.61■■□□□ 1.21
TMEM260-202ENST00000538838 CDK15Q96Q40 435 aa22.61■■□□□ 1.21
TMEM260-202ENST00000538838 DPH7Q9BTV6 452 aa22.61■■□□□ 1.21
TMEM260-202ENST00000538838 SHCBP1LQ9BZQ2 653 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms