RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 FAM180BQ6P0A1 224 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 KIAA1324Q6UXG2 1013 aaKnown RBP13.67□□□□□ -0.22
ACTN1-205ENST00000538545 TP53I13Q8NBR0 393 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-205ENST00000538545 TFGQ92734 400 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-205ENST00000538545 RAB7BQ96AH8 199 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 XKR8Q9H6D3 395 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 SUCOQ9UBS9 1254 aaKnown RBP13.67□□□□□ -0.22
ACTN1-205ENST00000538545 AURKCQ9UQB9 309 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 FAM149AA5PLN7 773 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 RNGTTO60942 597 aaKnown RBP13.67□□□□□ -0.22
ACTN1-205ENST00000538545 TIPRLO75663 272 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 STATHP02808 62 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 IGFALSP35858 605 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 OR4D2P58180 307 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 RD3Q7Z3Z2 195 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 PQLC1Q8N2U9 271 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 MINDY1Q8N5J2 469 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 OR56A3Q8NH54 315 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 HUS1BQ8NHY5 278 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 WDR20Q8TBZ3 569 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 CCT7Q99832 543 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 INPP5KQ9BT40 448 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 SLC17A9Q9BYT1 436 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 ALG2Q9H553 416 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 C2orf42Q9NWW7 574 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 ABCD2Q9UBJ2 740 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 NDRG2Q9UN36 371 aaKnown RBP13.67□□□□□ -0.22
ACTN1-205ENST00000538545 ADH1BP00325 375 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 TGFB1P01137 390 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 PGRP06401 933 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 CDKN2CP42773 168 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 SGCGQ13326 291 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 TPRG1LQ5T0D9 272 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 LRRTM4Q86VH4 590 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 DHFR2Q86XF0 187 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 SLC44A3Q8N4M1 653 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 OR7G3Q8NG95 312 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 OR7A2PQ8NGA2 310 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 OR9A1PQ8NGU1 263 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 TBCDQ9BTW9 1192 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 SLC29A3Q9BZD2 475 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 GID8Q9NWU2 228 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 GPRC5BQ9NZH0 403 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 CD207Q9UJ71 328 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 MCM8Q9UJA3 840 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 ANHXE9PGG2 379 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 AMD1P17707 334 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 RPS13P62277 151 aaKnown RBP13.66□□□□□ -0.22
ACTN1-205ENST00000538545 CDKL4Q5MAI5 379 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 CACHD1Q5VU97 1274 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 HACD2Q6Y1H2 254 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 Q6ZS52 159 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 MTSS1LQ765P7 747 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 GALNT4Q8N4A0 578 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 HM13Q8TCT9 377 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 SLC13A3Q8WWT9 602 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 ZNF184Q99676 751 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-205ENST00000538545 EPHX3Q9H6B9 360 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 SLC25A37Q9NYZ2 338 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 ERVK-11Q9UQG0 969 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 BTBD3Q9Y2F9 522 aa13.66□□□□□ -0.22
ACTN1-205ENST00000538545 TRBV23OR9-2A0A075B6M9 112 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 VEGFDO43915 354 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 JAK1P23458 1154 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 SWT1Q5T5J6 900 aaKnown RBP13.65□□□□□ -0.22
ACTN1-205ENST00000538545 ADAMTSL4Q6UY14 1074 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 PLD3Q8IV08 490 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 MSRB3Q8IXL7 192 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 CLEC4FQ8N1N0 589 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 GTF2H4Q92759 462 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 SIPA1Q96FS4 1042 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 OR52E6Q96RD3 313 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 HOPXQ9BPY8 73 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-205ENST00000538545 SORBS1Q9BX66 1292 aaKnown RBP13.65□□□□□ -0.22
ACTN1-205ENST00000538545 OR51B5Q9H339 312 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 MRGBPQ9NV56 204 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 RIMS3Q9UJD0 308 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 GPR34Q9UPC5 381 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 ARPC2O15144 300 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 GCKP35557 465 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 TNFRSF4P43489 277 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 CYP4F2P78329 520 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 SLBPQ14493 270 aaKnown RBP eCLIP13.65□□□□□ -0.22
ACTN1-205ENST00000538545 SKIV2LQ15477 1246 aaKnown RBP13.65□□□□□ -0.22
ACTN1-205ENST00000538545 MAPKAPK3Q16644 382 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 GGTA1PQ4G0N0 100 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 OR4F3Q6IEY1 312 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 NOXRED1Q6NXP6 359 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 SLCO4C1Q6ZQN7 724 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 C1orf52Q8N6N3 182 aaKnown RBP13.65□□□□□ -0.22
ACTN1-205ENST00000538545 MRGPRX1Q96LB2 322 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 CGREF1Q99674 301 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 ECSITQ9BQ95 431 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 IMP3Q9NV31 184 aaKnown RBP13.65□□□□□ -0.22
ACTN1-205ENST00000538545 CUEDC1Q9NWM3 386 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-205ENST00000538545 GPSM3Q9Y4H4 160 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 SNX13Q9Y5W8 968 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 KCNE2Q9Y6J6 123 aa13.65□□□□□ -0.22
ACTN1-205ENST00000538545 SHISA7A6NL88 538 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 YY2O15391 372 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms