RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ZNF295-AS1Q8N0V1 137 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 KRT222Q8N1A0 295 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 AMER2Q8N7J2 671 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 FAM71DQ8N9W8 422 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 ASZ1Q8WWH4 475 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 CABS1Q96KC9 395 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 C10orf90Q96M02 699 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 TRPC4Q9UBN4 977 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 SLC2A6Q9UGQ3 507 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 IGHV1-45A0A0A0MS14 117 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 TARM1B6A8C7 271 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 F8W8V4 182 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 CBFA2T2O43439 604 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 SRPX2O60687 465 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 SLC19A2O60779 497 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 WISP2O76076 250 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 BMP10O95393 424 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 GOT2P00505 430 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 APOA4P06727 396 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 ITGAMP11215 1152 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 CTNNA1P35221 906 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 BDKRB1P46663 353 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 EMP2P54851 167 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 CASP6P55212 293 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 ADORA2A-AS1P86434 159 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 RBPJQ06330 500 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 PARP6Q2NL67 630 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 MUM1Q2TAK8 710 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.33□□□□□ -0.287e-15■□□□□ 8.3
SMARCA4-206ENST00000538456 NEK10Q6ZWH5 1172 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 VSTM4Q8IW00 320 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 OR13J1Q8NGT2 312 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 SUN3Q8TAQ9 357 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 SKA2Q8WVK7 121 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 HDAC10Q969S8 669 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 ZUFSPQ96AP4 578 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 TTC1Q99614 292 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 TSSK1BQ9BXA7 367 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 RAB11FIP5Q9BXF6 653 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 ENAMQ9NRM1 1142 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 TINAGQ9UJW2 476 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 RUVBL2Q9Y230 463 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 EFR3BQ9Y2G0 817 aa13.33□□□□□ -0.28
SMARCA4-206ENST00000538456 IGLV3-12A0A075B6K2 115 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 C19orf84I3L1E1 186 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 PRICKLE3O43900 615 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 PRAMEF2O60811 474 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 GPC4O75487 556 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 HEXBP07686 556 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 ESRRAP11474 423 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 PSMA3P25788 255 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 PTPN7P35236 360 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 KRTAP10-9P60411 292 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 YBX1P67809 324 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 ZNF33BQ06732 778 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 SEMA3AQ14563 771 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 TMED2Q15363 201 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 CDSNQ15517 529 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 C3AR1Q16581 482 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 CCSMST1Q4G0I0 132 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 ABHD17BQ5VST6 288 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 TTC23LQ6PF05 361 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 XKRXQ6PP77 449 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 AFTPHQ6ULP2 937 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 RNF44Q7L0R7 432 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 DNAAF3Q8N9W5 541 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 OR2L3Q8NG85 312 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 OR52K1Q8NGK4 314 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 OR6P1Q8NGX9 317 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 DNAJB8Q8NHS0 232 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 GSDMBQ8TAX9 411 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 RIC8BQ9NVN3 520 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 TTC7AQ9ULT0 858 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 PCDHA3Q9Y5H8 950 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 NFS1Q9Y697 457 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 SCN2AQ99250 2005 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 HEATR5BQ9P2D3 2071 aa13.32□□□□□ -0.28
SMARCA4-206ENST00000538456 OR5H15A6NDH6 313 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 FAM227AF5H4B4 570 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 TJP3O95049 919 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 FKBP9O95302 570 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 PTMAP06454 111 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 AOAHP28039 575 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 SSTR2P30874 369 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 GDF10P55107 478 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 DSG2Q14126 1118 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 P3H1Q32P28 736 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 RIPOR1Q6ZS17 1223 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 LDB1Q86U70 411 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 CNGA4Q8IV77 575 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 MAGED4Q96JG8 741 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 ZFYVE21Q9BQ24 234 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 ACAT2Q9BWD1 397 aa13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 TSPAN10Q9H1Z9 355 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 TSR3Q9UJK0 312 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 R3HDM2Q9Y2K5 976 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-206ENST00000538456 A0A1W2PQ72 361 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 H0YGG7 62 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 SLCO2B1O94956 709 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 SMSP52788 366 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms