RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TMEM214Q6NUQ4 689 aaKnown RBP16.41■□□□□ 0.22
SCARB1-205ENST00000538291 C22orf39Q6P5X5 142 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 ARMC5Q96C12 935 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 CNDP2Q96KP4 475 aaKnown RBP16.41■□□□□ 0.22
SCARB1-205ENST00000538291 CDK15Q96Q40 435 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 SERTAD3Q9UJW9 196 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 ITGB1BP2Q9UKP3 347 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 SEMA3DO95025 777 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 OR3A3P47888 321 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 OR3A2P47893 321 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 ZNF676Q8N7Q3 588 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 PNLDC1Q8NA58 520 aaKnown RBP16.41■□□□□ 0.22
SCARB1-205ENST00000538291 PDPRQ8NCN5 879 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 PEX16Q9Y5Y5 336 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 SPIN1Q9Y657 262 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-205ENST00000538291 CFAP20Q9Y6A4 193 aaKnown RBP16.41■□□□□ 0.22
SCARB1-205ENST00000538291 PCDHGA12O60330 932 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 CLDN7O95471 211 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 OAS1P00973 400 aaKnown RBP16.41■□□□□ 0.22
SCARB1-205ENST00000538291 ETS2P15036 469 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 GANABQ14697 944 aaKnown RBP16.41■□□□□ 0.22
SCARB1-205ENST00000538291 C1orf52Q8N6N3 182 aaKnown RBP16.41■□□□□ 0.22
SCARB1-205ENST00000538291 C1orf216Q8TAB5 229 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 ZNF516Q92618 1163 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 PCDHGA3Q9Y5H0 932 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 ADH1BP00325 375 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 KLK1P06870 262 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 ZNF3P17036 446 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 PDHA2P29803 388 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 HMGCS1Q01581 520 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 OR4E2Q8NGC2 313 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 KIAA1143Q96AT1 154 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-205ENST00000538291 CENPMQ9NSP4 180 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 PPM1HQ9ULR3 514 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 ANKRD66B4E2M5 251 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 J3KR12 359 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 MAGP20916 626 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 MAP3K8P41279 467 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 DECR1Q16698 335 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 KLHL26Q53HC5 615 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 DNAJA4Q8WW22 397 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-205ENST00000538291 FEM1AQ9BSK4 669 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 SLC29A3Q9BZD2 475 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 SIX2Q9NPC8 291 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 UTS2RQ9UKP6 389 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 SLC22A14Q9Y267 594 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 FKBP7Q9Y680 259 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 FOXO6A8MYZ6 492 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 TMEM63AO94886 807 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 SOD2P04179 222 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 GSTT2BP0CG30 244 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 SP140Q13342 867 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 ITPRIPL2Q3MIP1 535 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 ANO7Q6IWH7 933 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 THOC6Q86W42 341 aaKnown RBP16.4■□□□□ 0.22
SCARB1-205ENST00000538291 PROKR2Q8NFJ6 384 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 NCSTNQ92542 709 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 PNPLA2Q96AD5 504 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 GAL3ST1Q99999 423 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 MED28Q9H204 178 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 DZANK1Q9NVP4 752 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 HYKKA2RU49 373 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 BDKRB1P46663 353 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 IRF9Q00978 393 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 IQCCQ4KMZ1 466 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 GPR153Q6NV75 609 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 UTS2BQ765I0 119 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 C12orf40Q86WS4 652 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 FITM2Q8N6M3 262 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 DCAF4L2Q8NA75 395 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 KLHL6Q8WZ60 621 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 HTRA1Q92743 480 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 KLHDC7BQ96G42 594 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 ARHGAP9Q9BRR9 750 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 COPS4Q9BT78 406 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 SALL4Q9UJQ4 1053 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 FZD4Q9ULV1 537 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 KCNK6Q9Y257 313 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 TTC24A2A3L6 582 aaPredicted RBP16.4■□□□□ 0.22
SCARB1-205ENST00000538291 RPL10P27635 214 aaKnown RBP16.4■□□□□ 0.22
SCARB1-205ENST00000538291 LNX2Q8N448 690 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 CMASQ8NFW8 434 aaPredicted RBP16.4■□□□□ 0.22
SCARB1-205ENST00000538291 OR10G2Q8NGC3 310 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 POF1BQ8WVV4 589 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 SLC39A3Q9BRY0 314 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 KDELR3O43731 214 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 HSD11B1P28845 292 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 CDKN1CP49918 316 aaPredicted RBP16.4■□□□□ 0.22
SCARB1-205ENST00000538291 TMEM139Q8IV31 216 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 GHDCQ8N2G8 530 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 MINDY3Q9H8M7 445 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 PCDHB3Q9Y5E6 796 aa16.4■□□□□ 0.22
SCARB1-205ENST00000538291 GSTM3P21266 225 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 ECHS1P30084 290 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 LRRC66Q68CR7 880 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 SLC35B2Q8TB61 432 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 FCGR1BQ92637 280 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 LDAHQ9H6V9 325 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 TMLHEQ9NVH6 421 aa16.39■□□□□ 0.21
SCARB1-205ENST00000538291 CLIC1O00299 241 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms