RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 SLC9B2Q86UD5 537 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 WDR5BQ86VZ2 330 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CACUL1Q86Y37 369 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ZDHHC17Q8IUH5 632 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 VRK3Q8IV63 474 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 Q8N1X5 172 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 STK40Q8N2I9 435 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 AADATQ8N5Z0 425 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 DPP10Q8N608 796 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 PQLC3Q8N755 202 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 FAM46DQ8NEK8 389 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 OR8K1Q8NGG5 319 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 OR2A12Q8NGT7 310 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 OR56A3Q8NH54 315 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 GABPB2Q8TAK5 448 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CREB3L4Q8TEY5 395 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CTNNBL1Q8WYA6 563 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 TCEAL3Q969E4 200 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CAVIN3Q969G5 261 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SAT2Q96F10 170 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ZNF503Q96F45 646 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 PGAM5Q96HS1 289 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 REXO5Q96IC2 774 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CELF6Q96J87 481 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 VCPIP1Q96JH7 1222 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 BTN2A3PQ96KV6 586 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 FAM81BQ96LP2 452 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SERPINB11Q96P15 392 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SMIM14Q96QK8 99 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 HAPLN3Q96S86 360 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CNPY3Q9BT09 278 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ACAT2Q9BWD1 397 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 TPSD1Q9BZJ3 242 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 DCLK3Q9C098 648 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 TINAGL1Q9GZM7 467 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 C1orf21Q9H246 121 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SLC25A32Q9H2D1 315 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 MMADHCQ9H3L0 296 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 OSGEPL1Q9H4B0 414 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 NHEJ1Q9H9Q4 299 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 GPR35Q9HC97 309 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ABHD10Q9NUJ1 306 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 MRPS18AQ9NVS2 196 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 BEX4Q9NWD9 120 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 XPR1Q9UBH6 696 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 TRIM10Q9UDY6 481 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CNOT8Q9UFF9 292 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 OR12D3Q9UGF7 316 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 VPS51Q9UID3 782 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 GGA2Q9UJY4 613 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 FBXO4Q9UKT5 387 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 BLOC1S6Q9UL45 172 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 RABL2BQ9UNT1 228 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ERVW-1Q9UQF0 538 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 DNAJC16Q9Y2G8 782 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ZNF510Q9Y2H8 683 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 MRPS17Q9Y2R5 130 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 STON1Q9Y6Q2 735 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 FAM169AQ9Y6X4 670 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 FASNP49327 2511 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 EML5Q05BV3 1969 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 MIA3Q5JRA6 1907 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 KMT2BQ9UMN6 2715 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 DOCK4Q8N1I0 1966 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 CHD5Q8TDI0 1954 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 HELZP42694 1942 aaKnown RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 TBC1D3DA0A087WVF3 549 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 TBC1D3IA0A087WXS9 549 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 TBC1D3EA0A087X179 549 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 TBC1D3KA0A087X1G2 549 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 RNF103-CHMP3A0A140T963 221 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 hCG_1809904A0A1W2PP81 198 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 A0A1W2PPE2 198 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 A0A1W2PR64 198 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 TCRBV21S2A2A0A5A6 115 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 ILVBLA1L0T0 632 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 LRRD1A4D1F6 860 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 TBC1D3FA6NER0 549 aaPredicted RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 A8MV72 311 aaPredicted RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 A8MXE2 369 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 TMEM233B4DJY2 109 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 TBC1D3LB9A6J9 549 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 DIRC3C9JPN6 131 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 AKR1B15C9JRZ8 316 aaPredicted RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 F5H5T6 163 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 GOLGA6L19H0YKK7 550 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 STX16-NPEPL1H3BU86 382 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 J3KTA2 159 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 CDX4O14627 284 aaPredicted RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 STX16O14662 325 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 CASC3O15234 703 aaKnown RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 MID1O15344 667 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 SYNCRIPO60506 623 aaKnown RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 KERAO60938 352 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 SEC22BO75396 215 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 LCA5LO95447 670 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 APBB3O95704 486 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 IGLV3-19P01714 112 aa2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 LMNAP02545 664 aaKnown RBP2.53□□□□□ -2
TNFRSF1A-210ENST00000537842 CFIP05156 583 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms