RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 IFNKQ9P0W0 207 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 TRPC4Q9UBN4 977 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 ICKQ9UPZ9 632 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 CFAP99D6REC4 459 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 UGT1A9O60656 530 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 SRPX2O60687 465 aaPredicted RBP8.67□□□□□ -1.02
USP28-205ENST00000537706 CNOT4O95628 575 aaKnown RBP8.67□□□□□ -1.02
USP28-205ENST00000537706 HLA-DQB2P05538 268 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 C8orf89P0DMQ9 161 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 ERVK-10P10266 1014 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 UGT1A6P19224 532 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 FPR1P21462 350 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 MIPP30301 263 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 BOP1Q14137 746 aaKnown RBP8.67□□□□□ -1.02
USP28-205ENST00000537706 EXT1Q16394 746 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 GXYLT1Q4G148 440 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 H3F3CQ6NXT2 135 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 ZNF585AQ6P3V2 769 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 FAM151BQ6UXP7 276 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 CRLF3Q8IUI8 442 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 LGI4Q8N135 537 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 IMMP1LQ96LU5 166 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 PEBP4Q96S96 227 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 C19orf24Q9BVV8 132 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 UGT1A7Q9HAW7 530 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 UGT1A10Q9HAW8 530 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 UGT1A8Q9HAW9 530 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 MKKSQ9NPJ1 570 aaPredicted RBP8.67□□□□□ -1.02
USP28-205ENST00000537706 LUC7LQ9NQ29 371 aaKnown RBP8.67□□□□□ -1.02
USP28-205ENST00000537706 ETNK2Q9NVF9 386 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 CCDC88CQ9P219 2028 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 PKP3Q9Y446 797 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 HRH3Q9Y5N1 445 aa8.67□□□□□ -1.02
USP28-205ENST00000537706 CHD3Q12873 2000 aaKnown RBP8.67□□□□□ -1.02
USP28-205ENST00000537706 ANKRD12Q6UB98 2062 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 ATRQ13535 2644 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 A0A0G2JNJ9 132 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 FITM1A5D6W6 292 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 DVL2O14641 736 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 TLX2O43763 284 aaPredicted RBP8.66□□□□□ -1.02
USP28-205ENST00000537706 HS6ST1O60243 411 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 MAGP20916 626 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 MCM3P25205 808 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 RPA4Q13156 261 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 DPYSL2Q16555 572 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 RNFT1Q5M7Z0 435 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 PPP1R2P3Q6NXS1 205 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 TMEM205Q6UW68 189 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 MON1BQ7L1V2 547 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 POLNQ7Z5Q5 900 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 DAAM2Q86T65 1068 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 TMTC1Q8IUR5 882 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 LRRC8AQ8IWT6 810 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 COG4Q9H9E3 785 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 IL26Q9NPH9 171 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 SMOXQ9NWM0 555 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 Q9UFV3 132 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 EIF3LQ9Y262 564 aaKnown RBP8.66□□□□□ -1.02
USP28-205ENST00000537706 HSPB2A8KAH6 182 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 NPIPA2E9PIF3 369 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 NPIPA3F8WFD2 350 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 ACOT7O00154 380 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 PES1O00541 588 aaKnown RBP8.66□□□□□ -1.02
USP28-205ENST00000537706 SEC24DO94855 1032 aaPredicted RBP8.66□□□□□ -1.02
USP28-205ENST00000537706 CYC1P08574 325 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 GLI4P10075 376 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 UCHL3P15374 230 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 CHRNB2P17787 502 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 HMGCLP35914 325 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 CHRNA4P43681 627 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 CYB561P49447 251 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 IHHQ14623 411 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 HSPB2Q16082 182 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 MAN2A1Q16706 1144 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 TPD52L1Q16890 204 aaPredicted RBP8.66□□□□□ -1.02
USP28-205ENST00000537706 BOLA3Q53S33 107 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 WASHC2DQ5SRD0 308 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 RIPPLY2Q5TAB7 128 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 LAPTM4BQ86VI4 370 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 M1APQ8TC57 530 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 HEXDCQ8WVB3 486 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 HSPH1Q92598 858 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 PERPQ96FX8 193 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 PLCD4Q9BRC7 762 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 PARVAQ9NVD7 372 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 SPHK1Q9NYA1 384 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 ADGRE2Q9UHX3 823 aa8.66□□□□□ -1.02
USP28-205ENST00000537706 TDRKHQ9Y2W6 561 aaKnown RBP8.66□□□□□ -1.02
USP28-205ENST00000537706 TCRBV5S1A1TA0A578 114 aa8.65□□□□□ -1.02
USP28-205ENST00000537706 OR14I1A6ND48 311 aa8.65□□□□□ -1.02
USP28-205ENST00000537706 WDR1O75083 606 aa8.65□□□□□ -1.02
USP28-205ENST00000537706 NEURL1O76050 574 aa8.65□□□□□ -1.02
USP28-205ENST00000537706 PDE9AO76083 593 aa8.65□□□□□ -1.02
USP28-205ENST00000537706 NDST3O95803 873 aa8.65□□□□□ -1.02
USP28-205ENST00000537706 SERPINC1P01008 464 aa8.65□□□□□ -1.02
USP28-205ENST00000537706 TPM2P07951 284 aa8.65□□□□□ -1.02
USP28-205ENST00000537706 VSX2P58304 361 aaPredicted RBP8.65□□□□□ -1.02
USP28-205ENST00000537706 CCZ1BP86790 482 aa8.65□□□□□ -1.02
USP28-205ENST00000537706 CCZ1P86791 482 aaPredicted RBP8.65□□□□□ -1.02
USP28-205ENST00000537706 OGDHQ02218 1023 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms