RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 KIAA1549LQ6ZVL6 1849 aa16.92■□□□□ 0.3
SNX17-210ENST00000537606 BMP2P12643 396 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 IL10P22301 178 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 EEFSECP57772 596 aaKnown RBP16.91■□□□□ 0.3
SNX17-210ENST00000537606 CST6Q15828 149 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 SMU1Q2TAY7 513 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 PGS1Q32NB8 556 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 ITPRIPL2Q3MIP1 535 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 PTRH1Q86Y79 214 aaKnown RBP16.91■□□□□ 0.3
SNX17-210ENST00000537606 ANKFN1Q8N957 763 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 CMTM7Q96FZ5 175 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 TSC22D3Q99576 134 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 TRMT61BQ9BVS5 477 aaKnown RBP16.91■□□□□ 0.3
SNX17-210ENST00000537606 SLC6A17Q9H1V8 727 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 AGPAT4Q9NRZ5 378 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 CLEC1BQ9P126 229 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.91■□□□□ 0.3
SNX17-210ENST00000537606 SLC23A2Q9UGH3 650 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 NUP214P35658 2090 aaPredicted RBP16.91■□□□□ 0.3
SNX17-210ENST00000537606 AP1G1O43747 822 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 GSNP06396 782 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 AMD1P17707 334 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 HSPA13P48723 471 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 WSCD2Q2TBF2 565 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 C2orf27AQ580R0 203 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 CATSPEREQ5SY80 951 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 AGBL4Q5VU57 503 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 FAM46CQ5VWP2 391 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 LIPJQ5W064 366 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 C11orf96Q7Z7L8 435 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 APLFQ8IW19 511 aaPredicted RBP16.91■□□□□ 0.3
SNX17-210ENST00000537606 CHERPQ8IWX8 916 aaKnown RBP16.91■□□□□ 0.3
SNX17-210ENST00000537606 HDDC3Q8N4P3 179 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 OR56A3Q8NH54 315 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 CDC26Q8NHZ8 85 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 WDR20Q8TBZ3 569 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 THUMPD3Q9BV44 507 aaKnown RBP16.91■□□□□ 0.3
SNX17-210ENST00000537606 SGK2Q9HBY8 427 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 MBNL1Q9NR56 388 aaKnown RBP16.91■□□□□ 0.3
SNX17-210ENST00000537606 SLC25A37Q9NYZ2 338 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 PLAGL1Q9UM63 463 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 PPT2Q9UMR5 302 aa16.91■□□□□ 0.3
SNX17-210ENST00000537606 CFAP20Q9Y6A4 193 aaKnown RBP16.91■□□□□ 0.3
SNX17-210ENST00000537606 BRWD1Q9NSI6 2320 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 HNRNPRO43390 633 aaKnown RBP16.9■□□□□ 0.3
SNX17-210ENST00000537606 ETHE1O95571 254 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 NPPAP01160 153 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 IL6P05231 212 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 PCNAP12004 261 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 TBPL1P62380 186 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 PLOD1Q02809 727 aaPredicted RBP16.9■□□□□ 0.3
SNX17-210ENST00000537606 KIAA1211LQ6NV74 962 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 NOXRED1Q6NXP6 359 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 PNCKQ6P2M8 343 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 TMEM184AQ6ZMB5 413 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 TMPRSS11BQ86T26 416 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 GLB1L3Q8NCI6 653 aaPredicted RBP16.9■□□□□ 0.3
SNX17-210ENST00000537606 EZH1Q92800 747 aaPredicted RBP16.9■□□□□ 0.3
SNX17-210ENST00000537606 BIRC7Q96CA5 298 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 AURKBQ96GD4 344 aaPredicted RBP16.9■□□□□ 0.3
SNX17-210ENST00000537606 IL17FQ96PD4 163 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 TRAPPC9Q96Q05 1148 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 ASIC5Q9NY37 505 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 OR1A2Q9Y585 309 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 KANSL1LA0AUZ9 987 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 PAK4O96013 591 aaPredicted RBP16.9■□□□□ 0.3
SNX17-210ENST00000537606 FAM58BPP0C7Q3 252 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 FASP25445 335 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 CLDN8P56748 225 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 PYCR3Q53H96 274 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 CES5AQ6NT32 575 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 MSRB3Q8IXL7 192 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 PHACTR4Q8IZ21 702 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 DTWD1Q8N5C7 304 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 TRPV3Q8NET8 790 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 OR10A6Q8NH74 314 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 ELSPBP1Q96BH3 223 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 INPP5KQ9BT40 448 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 TBCDQ9BTW9 1192 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 OAZ3Q9UMX2 235 aa16.9■□□□□ 0.3
SNX17-210ENST00000537606 MAGEB17A8MXT2 336 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 ETS2P15036 469 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 RPL10P27635 214 aaKnown RBP16.89■□□□□ 0.29
SNX17-210ENST00000537606 POLE2P56282 527 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 RAB30Q15771 203 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 GLYATQ6IB77 296 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 RAB7BQ96AH8 199 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 CENPKQ9BS16 269 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 VPS29Q9UBQ0 182 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 K7EQS6 105 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 DLGAP1O14490 977 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 TFAP2AP05549 437 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 S100A3P33764 101 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 MEF2AQ02078 507 aaPredicted RBP16.89■□□□□ 0.29
SNX17-210ENST00000537606 PPP4R4Q6NUP7 873 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 OR2L2Q8NH16 312 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 GANCQ8TET4 914 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 ZNF583Q96ND8 569 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 FAM192AQ9GZU8 254 aa16.89■□□□□ 0.29
SNX17-210ENST00000537606 RSPH9Q9H1X1 276 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms