RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 SMC6Q96SB8 1091 aa8.89□□□□□ -0.99
CPSF7-217ENST00000537162 ZFYVE21Q9BQ24 234 aa8.89□□□□□ -0.99
CPSF7-217ENST00000537162 SNRNP25Q9BV90 132 aaKnown RBP8.89□□□□□ -0.99
CPSF7-217ENST00000537162 YIPF2Q9BWQ6 316 aa8.89□□□□□ -0.99
CPSF7-217ENST00000537162 POLR1EQ9GZS1 481 aaKnown RBP8.89□□□□□ -0.99
CPSF7-217ENST00000537162 NLRC4Q9NPP4 1024 aa8.89□□□□□ -0.99
CPSF7-217ENST00000537162 TRPC4Q9UBN4 977 aa8.89□□□□□ -0.99
CPSF7-217ENST00000537162 DNAJC12Q9UKB3 198 aa8.89□□□□□ -0.99
CPSF7-217ENST00000537162 ZNF711Q9Y462 761 aa8.89□□□□□ -0.99
CPSF7-217ENST00000537162 TTLL3Q9Y4R7 772 aa8.89□□□□□ -0.99
CPSF7-217ENST00000537162 OR2W5A6NFC9 320 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 FAM166BA8MTA8 275 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 QSOX1O00391 747 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 NRP2O60462 931 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 PAX1P15863 534 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 FPR1P21462 350 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 AMPD1P23109 780 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 PDHA2P29803 388 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 AGFG1P52594 562 aaKnown RBP8.88□□□□□ -0.99
CPSF7-217ENST00000537162 ZNF143P52747 638 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-217ENST00000537162 RPL7AP62424 266 aaKnown RBP8.88□□□□□ -0.99
CPSF7-217ENST00000537162 KRT85P78386 507 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 BOP1Q14137 746 aaKnown RBP8.88□□□□□ -0.99
CPSF7-217ENST00000537162 WASHC2DQ5SRD0 308 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 FKBP15Q5T1M5 1219 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 FOXD4L5Q5VV16 416 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-217ENST00000537162 FRMPD2BQ6IN97 320 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 FIGLAQ6QHK4 219 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 CYP4V2Q6ZWL3 525 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-217ENST00000537162 KIF18BQ86Y91 864 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 ATPAF2Q8N5M1 289 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 AMER3Q8N944 861 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 TTC29Q8NA56 475 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-217ENST00000537162 MSANTD4Q8NCY6 345 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 DDHD1Q8NEL9 900 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 TNIP2Q8NFZ5 429 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 FOXD4L4Q8WXT5 416 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-217ENST00000537162 C10orf90Q96M02 699 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 ZCCHC2Q9C0B9 1178 aaKnown RBP8.88□□□□□ -0.99
CPSF7-217ENST00000537162 VPS16Q9H269 839 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 OR52A5Q9H2C5 316 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 IL26Q9NPH9 171 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 ENAMQ9NRM1 1142 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 ZNF701Q9NV72 531 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-217ENST00000537162 ALKBH4Q9NXW9 302 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 FOXD3Q9UJU5 478 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-217ENST00000537162 PLAGL1Q9UM63 463 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.88□□□□□ -0.99
CPSF7-217ENST00000537162 SPO11Q9Y5K1 396 aa8.88□□□□□ -0.99
CPSF7-217ENST00000537162 YLPM1P49750 1951 aaKnown RBP8.88□□□□□ -0.99
CPSF7-217ENST00000537162 BIRC6Q9NR09 4857 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 LOC105369274A0A096LPK9 316 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 LOC102723532A0A0G2JNH3 316 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 SH3D21A4FU49 640 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 HSPB2A8KAH6 182 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 DEFB108AA8MXU0 73 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 ISM1B1AKI9 464 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 DVL2O14641 736 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 BCKDKO14874 412 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 GPR37O15354 613 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 CTSVO60911 334 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 C8orf89P0DMQ9 161 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 PON1P27169 355 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 NDUFA8P51970 172 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 CDH6P55285 790 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 ATP5J2P56134 94 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 SORDQ00796 357 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 HSPB2Q16082 182 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 FAM214AQ32MH5 1076 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 COBLL1Q53SF7 1204 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 CPEB2Q7Z5Q1 589 aaKnown RBP8.87□□□□□ -0.99
CPSF7-217ENST00000537162 ZC3H7AQ8IWR0 971 aaKnown RBP8.87□□□□□ -0.99
CPSF7-217ENST00000537162 OR4N4Q8N0Y3 316 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 KIF2BQ8N4N8 673 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 OR5AR1Q8NGP9 310 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 ZMYND19Q96E35 227 aaPredicted RBP8.87□□□□□ -0.99
CPSF7-217ENST00000537162 LRRC46Q96FV0 321 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 CAPZA3Q96KX2 299 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 DACH2Q96NX9 599 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 HS3ST6Q96QI5 342 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 KCNK17Q96T54 332 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 SELENOSQ9BQE4 189 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 GPR63Q9BZJ6 419 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 TRIM45Q9H8W5 580 aaPredicted RBP8.87□□□□□ -0.99
CPSF7-217ENST00000537162 RAD18Q9NS91 495 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 DEPPQ9NTK1 212 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 MTRF1LQ9UGC7 380 aaKnown RBP8.87□□□□□ -0.99
CPSF7-217ENST00000537162 PCSK1NQ9UHG2 260 aa8.87□□□□□ -0.99
CPSF7-217ENST00000537162 KLF13Q9Y2Y9 288 aaPredicted RBP8.87□□□□□ -0.99
CPSF7-217ENST00000537162 EML6Q6ZMW3 1958 aa8.86□□□□□ -0.99
CPSF7-217ENST00000537162 TCRBV5S1A1TA0A578 114 aa8.86□□□□□ -0.99
CPSF7-217ENST00000537162 GAPDHSO14556 408 aaPredicted RBP8.86□□□□□ -0.99
CPSF7-217ENST00000537162 PRPSAP2O60256 369 aa8.86□□□□□ -0.99
CPSF7-217ENST00000537162 WDR1O75083 606 aa8.86□□□□□ -0.99
CPSF7-217ENST00000537162 ALX3O95076 343 aa8.86□□□□□ -0.99
CPSF7-217ENST00000537162 MATN4O95460 622 aa8.86□□□□□ -0.99
CPSF7-217ENST00000537162 HLA-DQB2P05538 268 aa8.86□□□□□ -0.99
CPSF7-217ENST00000537162 CELA3AP09093 270 aa8.86□□□□□ -0.99
CPSF7-217ENST00000537162 CD86P42081 329 aa8.86□□□□□ -0.99
CPSF7-217ENST00000537162 CYB561P49447 251 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms