RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 TUBB3Q13509 450 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 BOP1Q14137 746 aaKnown RBP6.82□□□□□ -1.32
YBX3-206ENST00000536823 KRT33BQ14525 404 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 IL11RAQ14626 422 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 TPSAB1Q15661 275 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 AARS2Q5JTZ9 985 aaKnown RBP6.82□□□□□ -1.32
YBX3-206ENST00000536823 PCID2Q5JVF3 399 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 DNTTIP2Q5QJE6 756 aaKnown RBP6.82□□□□□ -1.32
YBX3-206ENST00000536823 ARMC6Q6NXE6 501 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 CYB5D1Q6P9G0 228 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 ZNF449Q6P9G9 518 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 CERS6Q6ZMG9 384 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 GSTA5Q7RTV2 222 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 TIPARPQ7Z3E1 657 aaKnown RBP6.82□□□□□ -1.32
YBX3-206ENST00000536823 RASGEF1CQ8N431 466 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 ESX1Q8N693 406 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 SIDT2Q8NBJ9 832 aaKnown RBP6.82□□□□□ -1.32
YBX3-206ENST00000536823 OR4L1Q8NH43 312 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 LCN9Q8WX39 176 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 KIAA1143Q96AT1 154 aaPredicted RBP6.82□□□□□ -1.32
YBX3-206ENST00000536823 SLC45A3Q96JT2 553 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 PBKQ96KB5 322 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 OR6C1Q96RD1 312 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 TTC1Q99614 292 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 MAP3K3Q99759 626 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 HGH1Q9BTY7 390 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 SLC12A9Q9BXP2 914 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 ULBP3Q9BZM4 244 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 IL22Q9GZX6 179 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 HRASLS2Q9NWW9 162 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 BFARQ9NZS9 450 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 GPR160Q9UJ42 338 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 POMT2Q9UKY4 750 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 TTC7AQ9ULT0 858 aaPredicted RBP6.82□□□□□ -1.32
YBX3-206ENST00000536823 JRKLQ9Y4A0 524 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 PRSS21Q9Y6M0 314 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 TENM4Q6N022 2769 aa6.82□□□□□ -1.32
YBX3-206ENST00000536823 PTPN13Q12923 2485 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 LOC101059948A0A1B0GTJ6 334 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 UBA6A0AVT1 1052 aaPredicted RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 SLC5A10A0PJK1 596 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 GOLGA6L3A6NEY3 463 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 ZNF891A8MT65 544 aaPredicted RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 AP3B1O00203 1094 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 PGRMC1O00264 195 aaKnown RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 MATN2O00339 956 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 BTN3A1O00481 513 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 PRMT5O14744 637 aaPredicted RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 OR1I1O60431 355 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 SPAG6O75602 509 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 KIAA0754O94854 1291 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 ZBTB11O95625 1053 aaPredicted RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 EBLN1P0CF75 366 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 FOLR1P15328 257 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 ZNF28P17035 718 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 POLR2CP19387 275 aaPredicted RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 PPARGP37231 505 aaPredicted RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 MAGEA6P43360 314 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 ARCN1P48444 511 aaKnown RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 NPY2RP49146 381 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 VPS41P49754 854 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 CRADDP78560 199 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 PLOD1Q02809 727 aaPredicted RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 ACY1Q03154 408 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 EGR3Q06889 387 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 PRKAA1Q13131 559 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 LY6DQ14210 128 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 SEMA3AQ14563 771 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 KCNJ11Q14654 390 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 KCNAB1Q14722 419 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 CYP1B1Q16678 543 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 SYTL3Q4VX76 610 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 ARMC3Q5W041 872 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 TTC27Q6P3X3 843 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 PPP1R3BQ86XI6 285 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 RASGRP3Q8IV61 690 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 REXO1L1PQ8IX06 675 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 SLC35F6Q8N357 371 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 MPP5Q8N3R9 675 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 ZNF843Q8N446 348 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 D2HGDHQ8N465 521 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 OR4E2Q8NGC2 313 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 OR52E1Q8NGJ3 308 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 LKAAEAR1Q8TD35 194 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 ELMO1Q92556 727 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 TFGQ92734 400 aaPredicted RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 FCRL4Q96PJ5 515 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 NAP1L3Q99457 506 aaPredicted RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 EFHD1Q9BUP0 239 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 SEMA4CQ9C0C4 833 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 KLHL25Q9H0H3 589 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 SRMSQ9H3Y6 488 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 TFB2MQ9H5Q4 396 aaKnown RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 GPN2Q9H9Y4 310 aaPredicted RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 MRM3Q9HC36 420 aaKnown RBP6.81□□□□□ -1.32
YBX3-206ENST00000536823 PDE7BQ9NP56 450 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 TREX1Q9NSU2 369 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 CATSPERZQ9NTU4 200 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 SYBUQ9NX95 663 aa6.81□□□□□ -1.32
YBX3-206ENST00000536823 PRR13Q9NZ81 148 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms