RNA–Protein interactions for RNA: ENST00000536265.5

DDX11-208, Transcript of DEAD/H-box helicase 11, human

TSL 5

Gene DDX11, Length 3,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-208	ENST00000536265	EGLN2	Q96KS0	407 aa		11.17	□□□□□ -0.62
DDX11-208	ENST00000536265	FAM129B	Q96TA1	746 aa		11.17	□□□□□ -0.62
DDX11-208	ENST00000536265	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.17	□□□□□ -0.62
DDX11-208	ENST00000536265	TBC1D3D	A0A087WVF3	549 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TBC1D3I	A0A087WXS9	549 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TBC1D3E	A0A087X179	549 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TBC1D3K	A0A087X1G2	549 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	SLC5A10	A0PJK1	596 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TBC1D3L	B9A6J9	549 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	VEGFD	O43915	354 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	FKBP9	O95302	570 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	PGM3	O95394	542 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	CLPTM1	O96005	669 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	DNTT	P04053	509 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	NTRK1	P04629	796 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TBC1D3H	P0C7X1	549 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	ZNF8	P17098	575 aa	Predicted RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	NELFE	P18615	380 aa	Known RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	RPL10	P27635	214 aa	Known RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	OXTR	P30559	389 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	MAT2A	P31153	395 aa	Known RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	HPCAL1	P37235	193 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	SOX9	P48436	509 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	VAC14	Q08AM6	782 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	CST6	Q15828	149 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	GTDC1	Q4AE62	458 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TBC1D3G	Q6DHY5	549 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TBC1D3C	Q6IPX1	549 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	FKBP9P1	Q75LS8	142 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	LRRTM4	Q86VH4	590 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	OR8J3	Q8NGG0	315 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TFG	Q92734	400 aa	Predicted RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	GATA6	Q92908	595 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TSC22D3	Q99576	134 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	PLAGL1	Q9UM63	463 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	LAMA2	P24043	3122 aa	Known RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	ARHGAP10	A1A4S6	786 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	SAP18	O00422	153 aa	Known RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	FPGT	O14772	594 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	AREL1	O15033	823 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	SDC1	P18827	310 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TACR1	P25103	407 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	PRKCQ	Q04759	706 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	SELPLG	Q14242	412 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TCEA2	Q15560	299 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	GGTA1P	Q4G0N0	100 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	USP39	Q53GS9	565 aa	Known RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	STK32C	Q86UX6	486 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	FAM124A	Q86V42	546 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	PNPT1	Q8TCS8	783 aa	Known RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	GTF2H4	Q92759	462 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	ASPSCR1	Q9BZE9	553 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	WDR26	Q9H7D7	661 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	OBP2A	Q9NY56	170 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	OAZ3	Q9UMX2	235 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	MAGEB17	A8MXT2	336 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	PI15	O43692	258 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TGFB1	P01137	390 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	POU2F2	P09086	479 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	IMPA1	P29218	277 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	RPS13	P62277	151 aa	Known RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	MEF2A	Q02078	507 aa	Predicted RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	CSTF3	Q12996	717 aa	Known RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	TMTC4	Q5T4D3	741 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	CPTP	Q5TA50	214 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	ZNF480	Q8WV37	535 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	IL17F	Q96PD4	163 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	REXO4	Q9GZR2	422 aa	Known RBP	11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	ACTL8	Q9H568	366 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	FBXL12	Q9NXK8	326 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	NUMA1	Q14980	2115 aa		11.16	□□□□□ -0.62
DDX11-208	ENST00000536265	GRXCR2	A6NFK2	248 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	SCAMP1	O15126	338 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	C1orf105	O95561	183 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	ALB	P02768	609 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	MYCLP1	P12525	358 aa	Predicted RBP	11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	SRSF11	Q05519	484 aa	Known RBP	11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	SF1	Q15637	639 aa	Known RBP	11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	HKDC1	Q2TB90	917 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	ZNF765	Q7L2R6	523 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	APLF	Q8IW19	511 aa	Predicted RBP	11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	KRT78	Q8N1N4	520 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	ZNF786	Q8N393	782 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	NEIL2	Q969S2	332 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	UBE2E3	Q969T4	207 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	RIPOR3	Q96MK2	946 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	EFCAB11	Q9BUY7	163 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	CLMP	Q9H6B4	373 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	RPF2	Q9H7B2	306 aa	Known RBP	11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	IMP3	Q9NV31	184 aa	Known RBP	11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	ARMC1	Q9NVT9	282 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	CLDND1	Q9NY35	253 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	PCDHB3	Q9Y5E6	796 aa		11.15	□□□□□ -0.62
DDX11-208	ENST00000536265	ANKDD1B	A6NHY2	528 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms