RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 PRKAB1Q9Y478 270 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 TCF20Q9UGU0 1960 aaKnown RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 RGS13O14921 159 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 GSTA4O15217 222 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 SLC22A1O15245 554 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 PLIN3O60664 434 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 ABCB7O75027 752 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 NDST3O95803 873 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 FMO3P31513 532 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 HLCSP50747 726 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 PLK1P53350 603 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 DSG2Q14126 1118 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 ADGRF1Q5T601 910 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 MARC1Q5VT66 337 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 SPESP1Q6UW49 350 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 RFLNAQ6ZTI6 216 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 CHMP1BQ7LBR1 199 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 THAP5Q7Z6K1 395 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 ZC3HC1Q86WB0 502 aaKnown RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 TMEM25Q86YD3 366 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 METTL4Q8N3J2 472 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 CPSF7Q8N684 471 aaKnown RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 OR9I1Q8NGQ6 314 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 C2orf15Q8WU43 125 aaKnown RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 SORCS1Q8WY21 1168 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 FBXW5Q969U6 566 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 NCLNQ969V3 563 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 ASB9Q96DX5 294 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 GPR78Q96P69 363 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 TRNT1Q96Q11 434 aaKnown RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 RBBP8Q99708 897 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 OMDQ99983 421 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 USB1Q9BQ65 265 aaKnown RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 SLA2Q9H6Q3 261 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 C12orf10Q9HB07 376 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 ZDHHC4Q9NPG8 344 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 RDH8Q9NYR8 311 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 TRHDEQ9UKU6 1024 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 ATG2BQ96BY7 2078 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 MROH6A6NGR9 719 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 ZNF99A8MXY4 864 aaPredicted RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 STX7O15400 261 aaKnown RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 TRIM13O60858 407 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 C1RP00736 705 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 IFNA14P01570 189 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 JUNP05412 331 aaKnown RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 SLC35E2BP0CK96 405 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 FGF3P11487 239 aaPredicted RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 ZNF250P15622 560 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 LAG3P18627 525 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 MYF6P23409 242 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 DPP6P42658 865 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 LEPRP48357 1165 aaKnown RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 SERPINB9P50453 376 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 CDKN2DP55273 166 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 ATP6V0D1P61421 351 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 GRSF1Q12849 480 aaKnown RBP eCLIP8.8□□□□□ -1
SF3B2-216ENST00000534765 TEAD2Q15562 447 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 BCL7AQ4VC05 210 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 GLYATQ6IB77 296 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 PKN3Q6P5Z2 889 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 GLRX5Q86SX6 157 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 LYSMD2Q8IV50 215 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 CMTM8Q8IZV2 173 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 OR13F1Q8NGS4 319 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 SNX18Q96RF0 628 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 SLC25A51Q9H1U9 297 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 LHX3Q9UBR4 397 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 STOML2Q9UJZ1 356 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 EFCAB9A8MZ26 197 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 F5H5T6 163 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 G3V2L1 256 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 LZTS3O60299 673 aaPredicted RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 HNRNPLP14866 589 aaKnown RBP eCLIP8.8□□□□□ -1
SF3B2-216ENST00000534765 TNNI3P19429 210 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 RFC2P35250 354 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 GALNT1Q10472 559 aaPredicted RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 CDH17Q12864 832 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 MAPRE2Q15555 327 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 ESCO2Q56NI9 601 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 TCEAL5Q5H9L2 206 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 NHSL2Q5HYW2 709 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 MBLAC2Q68D91 279 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 TYW3Q6IPR3 259 aaKnown RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 CLEC14AQ86T13 490 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 CARNMT1Q8N4J0 409 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 FBXL6Q8N531 539 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 MRPL43Q8N983 215 aaKnown RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 KREMEN2Q8NCW0 462 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 ITFG1Q8TB96 612 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 MCOLN3Q8TDD5 553 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 SLC30A3Q99726 388 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 APOL5Q9BWW9 433 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 SCN3BQ9NY72 215 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 TRPM5Q9NZQ8 1165 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 CFAP97Q9P2B7 532 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 BAIAP2Q9UQB8 552 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 COMMD10Q9Y6G5 202 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 PRORSD1PA6NEY8 169 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms