RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 TP73O15350 636 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 TTC4O95801 387 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 CATP04040 527 aaKnown RBP13.46□□□□□ -0.25
SF3B2-215ENST00000534307 ENO3P13929 434 aaPredicted RBP13.46□□□□□ -0.25
SF3B2-215ENST00000534307 MCM3P25205 808 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 GABRB3P28472 473 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 SKIV2L2P42285 1042 aaKnown RBP13.46□□□□□ -0.25
SF3B2-215ENST00000534307 ARSFP54793 590 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 FOXL2P58012 376 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 KLRB1Q12918 225 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 ATP1A4Q13733 1029 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 SSPNQ14714 243 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 SLC9A5Q14940 896 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 TCTE1Q5JU00 501 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 YOD1Q5VVQ6 348 aaPredicted RBP13.46□□□□□ -0.25
SF3B2-215ENST00000534307 FRMPD2BQ6IN97 320 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 PCGF5Q86SE9 256 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 MRGPREQ86SM8 312 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 KCNMB4Q86W47 210 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 CNTN4Q8IWV2 1026 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 SMPDL3AQ92484 453 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 FKBP10Q96AY3 582 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 PKP4Q99569 1192 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 GPR21Q99679 349 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 EBNA1BP2Q99848 306 aaKnown RBP13.46□□□□□ -0.25
SF3B2-215ENST00000534307 SELENOSQ9BQE4 189 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 SYNPO2LQ9H987 977 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 ACSS2Q9NR19 701 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 C2CD3Q4AC94 2353 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 HEATR5BQ9P2D3 2071 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 NUP210LQ5VU65 1888 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 BLACEA4D250 179 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 E7ENX8 843 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 EIF3FO00303 357 aaPredicted RBP13.45□□□□□ -0.26
SF3B2-215ENST00000534307 DSCR3O14972 297 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 SRPX2O60687 465 aaPredicted RBP13.45□□□□□ -0.26
SF3B2-215ENST00000534307 MED26O95402 600 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 SLC16A8O95907 504 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 UMODP07911 640 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 CD63P08962 238 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 MPC1LP0DKB6 136 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 ERVK-10P10266 1014 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 CCL11P51671 97 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 PNLIPRP1P54315 467 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 GNG11P61952 73 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 TAP2Q03519 686 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 GRM7Q14831 915 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 MLIPQ5VWP3 458 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 ZNF425Q6IV72 752 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 FBXO42Q6P3S6 717 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 SUSD1Q6UWL2 747 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 TTLL10Q6ZVT0 673 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 SYDE1Q6ZW31 735 aaPredicted RBP13.45□□□□□ -0.26
SF3B2-215ENST00000534307 MED25Q71SY5 747 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 COX15Q7KZN9 410 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 PPP1R32Q7Z5V6 425 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 RAB43Q86YS6 212 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 CPNE9Q8IYJ1 553 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 FAM26EQ8N5C1 309 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 TMEM102Q8N9M5 508 aaPredicted RBP13.45□□□□□ -0.26
SF3B2-215ENST00000534307 FDCSPQ8NFU4 85 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 ZNF480Q8WV37 535 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 INPP5DQ92835 1189 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 CAPZA3Q96KX2 299 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 NAT9Q9BTE0 207 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 SLC25A23Q9BV35 468 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 SLC26A1Q9H2B4 701 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 CCDC68Q9H2F9 335 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 WDR54Q9H977 334 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 IARS2Q9NSE4 1012 aaKnown RBP13.45□□□□□ -0.26
SF3B2-215ENST00000534307 CUTCQ9NTM9 273 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 IRAK4Q9NWZ3 460 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 PTRH2Q9Y3E5 179 aaKnown RBP13.45□□□□□ -0.26
SF3B2-215ENST00000534307 SAR1BQ9Y6B6 198 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 HIVEP3Q5T1R4 2406 aa13.45□□□□□ -0.26
SF3B2-215ENST00000534307 LOC105369274A0A096LPK9 316 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 LOC102723532A0A0G2JNH3 316 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 ALBP02768 609 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 OTX2P32243 289 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 HSD17B2P37059 387 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 FOLR3P41439 243 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 PGDP52209 483 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 RRADP55042 308 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 DR1Q01658 176 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 NAA25Q14CX7 972 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 MORF4L2Q15014 288 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 PRTGQ2VWP7 1150 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 SPANXN3Q5MJ09 141 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 WASHC2DQ5SRD0 308 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 HIBCHQ6NVY1 386 aaPredicted RBP13.44□□□□□ -0.26
SF3B2-215ENST00000534307 OVCH1Q7RTY7 1134 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 PIWIL4Q7Z3Z4 852 aaKnown RBP13.44□□□□□ -0.26
SF3B2-215ENST00000534307 GALNT7Q86SF2 657 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 PAQR7Q86WK9 346 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 LRRC56Q8IYG6 542 aaPredicted RBP13.44□□□□□ -0.26
SF3B2-215ENST00000534307 OR4N4Q8N0Y3 316 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 DTWD1Q8N5C7 304 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 TEX19Q8NA77 164 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.44□□□□□ -0.26
SF3B2-215ENST00000534307 CERS2Q96G23 380 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms