RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 UCK2Q9BZX2 261 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 PDE7BQ9NP56 450 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 SARS2Q9NP81 518 aaKnown RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 WASH6PQ9NQA3 447 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 KLC4Q9NSK0 619 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 OLAHQ9NV23 265 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 P4HTMQ9NXG6 502 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 CNOT8Q9UFF9 292 aaKnown RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 OR12D3Q9UGF7 316 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 TINAGQ9UJW2 476 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 PCDHA7Q9UN72 937 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 PLEKHA6Q9Y2H5 1048 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 TLN2Q9Y4G6 2542 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 ARHGEF17Q96PE2 2063 aaPredicted RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 NBEAL2Q6ZNJ1 2754 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 A0A1B0GVL5 298 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CFAP69A5D8W1 941 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 NKX2-6A6NCS4 301 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 OR52A4PA6NMU1 304 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 BECN2A8MW95 431 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 GOLGA8SH3BPF8 625 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 TRAFD1O14545 582 aaPredicted RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CETN3O15182 167 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 PROM1O43490 865 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 DAB1O75553 588 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 KLF7O75840 302 aaPredicted RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 SLCO2B1O94956 709 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 HEXIM1O94992 359 aaKnown RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 FKBP9O95302 570 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CLDN14O95500 239 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 LY86O95711 162 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CLEC2LP0C7M8 214 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 PNMA6AP0CW24 399 aaPredicted RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 RBP3P10745 1247 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 BRAFP15056 766 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 SYT1P21579 422 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 IL4RP24394 825 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 MGAT1P26572 445 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 RORAP35398 523 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CA7P43166 264 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 TSFMP43897 325 aaKnown RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 GPR1P46091 355 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 FMO5P49326 533 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 SUOXP51687 545 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 DRG2P55039 364 aaKnown RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 NRG3P56975 720 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 SESN3P58005 492 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 YWHAEP62258 255 aaKnown RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 BLOC1S1P78537 153 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 PDE1BQ01064 536 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 PMP22Q01453 160 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 OTUD4Q01804 1114 aaKnown RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 FOXI1Q12951 378 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 ABRQ12979 859 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 GPR18Q14330 331 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 IHHQ14623 411 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF169Q14929 603 aaPredicted RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 ASIC2Q16515 512 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CAMK4Q16566 473 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 C15orf59Q2T9L4 293 aaPredicted RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 BEAN1Q3B7T3 259 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 SPDYE7PQ495Y7 208 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 GLIPR1L2Q4G1C9 344 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 PTPN20Q4JDL3 420 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 ATP13A4Q4VNC1 1196 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 INO80DQ53TQ3 878 aaPredicted RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 BRMS1LQ5PSV4 323 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CFAP58Q5T655 872 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CCDC181Q5TID7 509 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 MANEALQ5VSG8 457 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 ABHD17BQ5VST6 288 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 FAAH2Q6GMR7 532 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 BRAT1Q6PJG6 821 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 FAM198BQ6UWH4 519 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 FKBP9P1Q75LS8 142 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 PRSS42Q7Z5A4 293 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 PPP1R32Q7Z5V6 425 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 STRA8Q7Z7C7 330 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 TMEM200AQ86VY9 491 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 HPS6Q86YV9 775 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 PHC2Q8IXK0 858 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 DSELQ8IZU8 1212 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CIARTQ8N365 385 aaPredicted RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CCDC185Q8N715 623 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 EMC1Q8N766 993 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 DNAAF3Q8N9W5 541 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 SIDT2Q8NBJ9 832 aaKnown RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 OR10H5Q8NGA6 315 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 OR1L3Q8NH93 324 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 HCAR2Q8TDS4 363 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 LINC00476Q8WZB0 136 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 SLC9A6Q92581 669 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 SNX21Q969T3 373 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 SLC35C1Q96A29 364 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 SH3KBP1Q96B97 665 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF501Q96CX3 271 aaPredicted RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 HDAC11Q96DB2 347 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 DTD2Q96FN9 168 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CELF6Q96J87 481 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms