RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 PRRG4Q9BZD6 226 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 PCDHAC1Q9H158 963 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 SRMSQ9H3Y6 488 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 TBC1D17Q9HA65 648 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 IFT46Q9NQC8 304 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 CD84Q9UIB8 345 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 MKLN1Q9UL63 735 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 OAZ3Q9UMX2 235 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 SLC45A1Q9Y2W3 748 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 SNX10Q9Y5X0 201 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 DUOX1Q9NRD9 1551 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 H7C2Y5 167 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 TLR4O00206 839 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 ITM2AO43736 263 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 ENTPD6O75354 484 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 C7P10643 843 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 ZNF3P17036 446 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 CD72P21854 359 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 ACVR2AP27037 513 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 IL12BP29460 328 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 SMSP52788 366 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 ZNF630Q2M218 657 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-236ENST00000533667 SH3D19Q5HYK7 790 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 SIRPB2Q5JXA9 342 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 CIR1Q86X95 450 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-236ENST00000533667 MCEMP1Q8IX19 187 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 ENDOVQ8N8Q3 282 aaKnown RBP6.85□□□□□ -1.31
CTNND1-236ENST00000533667 CHST4Q8NCG5 386 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 ZNF420Q8TAQ5 688 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-236ENST00000533667 KIAA1191Q96A73 305 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 LMLNQ96KR4 655 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 MYOCQ99972 504 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 WRAP53Q9BUR4 548 aaKnown RBP6.85□□□□□ -1.31
CTNND1-236ENST00000533667 NEUROD4Q9HD90 331 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 SNTG1Q9NSN8 517 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 CDH7Q9ULB5 785 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 FZD4Q9ULV1 537 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 ABCG2Q9UNQ0 655 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 SCML2Q9UQR0 700 aa6.85□□□□□ -1.31
CTNND1-236ENST00000533667 IQCMA0A1B0GVH7 501 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 RCBTB2O95199 551 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 RASGRP1O95267 797 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 EPOP01588 193 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 H1F0P07305 194 aaKnown RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 AZGP1P25311 298 aaKnown RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 RBM34P42696 430 aaKnown RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 GSK3BP49841 420 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 OR2B6P58173 313 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 RPL19P84098 196 aaKnown RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 EMX2Q04743 252 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 RBBP4Q09028 425 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 NADK2Q4G0N4 442 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 SH3PXD2AQ5TCZ1 1133 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 KLHDC10Q6PID8 442 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 FAM124AQ86V42 546 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 DNAJA4Q8WW22 397 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 TMBIM1Q969X1 311 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 SIPA1Q96FS4 1042 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 ART5Q96L15 291 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 SCGB3A2Q96PL1 93 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 SLC35A5Q9BS91 424 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 SAV1Q9H4B6 383 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 PIGVQ9NUD9 493 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 PCDHGB6Q9Y5F9 930 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 TCRBV7S3A2A0A539 114 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 KLRG2A4D1S0 409 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 CXorf49A8MYA2 514 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 B8ZZF3 427 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 CYB5AP00167 134 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 SPATA31D3P0C874 917 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 NPR2P20594 1047 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 MAGP20916 626 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 CHRNA4P43681 627 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 YAP1P46937 504 aaKnown RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 NCBP2P52298 156 aaKnown RBP eCLIP6.84□□□□□ -1.318e-20■□□□□ 11.1
CTNND1-236ENST00000533667 ATXN1P54253 815 aaKnown RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 MLLT6P55198 1093 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 SERINC3Q13530 473 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 PITRM1Q5JRX3 1037 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 SYPL2Q5VXT5 272 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 MBLAC2Q68D91 279 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 XKRXQ6PP77 449 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 SPATA31D4Q6ZUB0 917 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 PDSS2Q86YH6 399 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 OR13C4Q8NGS5 318 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 CLEC4CQ8WTT0 213 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 ERLEC1Q96DZ1 483 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 NUS1Q96E22 293 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 PYURFQ96I23 114 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 ZNF641Q96N77 438 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 COL21A1Q96P44 957 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 OR52B2Q96RD2 323 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 KCNS3Q9BQ31 491 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 CCM2Q9BSQ5 444 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 ZCCHC3Q9NUD5 404 aaKnown RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 CLEC4AQ9UMR7 237 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 FKBP7Q9Y680 259 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 STYXL1Q9Y6J8 313 aa6.84□□□□□ -1.31
CTNND1-236ENST00000533667 AFDNP55196 1824 aaKnown RBP6.84□□□□□ -1.31
CTNND1-236ENST00000533667 BHMG1C9JSJ3 638 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms