RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 MYO1GB0I1T2 1018 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 PCDHGA12O60330 932 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 RPLP0P05388 317 aaKnown RBP14.39□□□□□ -0.11
CAPN1-224ENST00000533129 CXCR2P25025 360 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 GNPDA1P46926 289 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 C1orf53Q5VUE5 145 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 SLC46A3Q7Z3Q1 461 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 ADAMTSL2Q86TH1 951 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 NPAS4Q8IUM7 802 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 IGSF8Q969P0 613 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 COPS4Q9BT78 406 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 TNKS2Q9H2K2 1166 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 RASSF1Q9NS23 344 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 WBP1LQ9NX94 342 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 PDP1Q9P0J1 537 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-224ENST00000533129 PNMA8CA0A1B0GUJ8 204 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 A6NL46 340 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 TBKBP1A7MCY6 615 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 E5RI56 91 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 KMOO15229 486 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 HOXC11O43248 304 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-224ENST00000533129 OR1I1O60431 355 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 GUCY1B2O75343 617 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 HOXB9P17482 250 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-224ENST00000533129 EPHA2P29317 976 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 YBEYP58557 167 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-224ENST00000533129 CREMQ03060 361 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 DDR2Q16832 855 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 TIGD6Q17RP2 521 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 C18orf21Q32NC0 220 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-224ENST00000533129 PRSS36Q5K4E3 855 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 PSAPL1Q6NUJ1 521 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 PIANPQ8IYJ0 282 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 SCLYQ96I15 445 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 SERHLQ9NQF3 203 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 FBXL12Q9NXK8 326 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 ZMYM5Q9UJ78 669 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.39□□□□□ -0.117e-22■■■■■ 89.9
CAPN1-224ENST00000533129 N6AMT1Q9Y5N5 214 aa14.39□□□□□ -0.11
CAPN1-224ENST00000533129 PLXNA3P51805 1871 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 C2orf81A6NN90 581 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 ZW10O43264 779 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 ZNF682O95780 498 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 SEMG1P04279 462 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 MNX1P50219 401 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-224ENST00000533129 TCTN1Q2MV58 587 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 FBXL22Q6P050 247 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 FAHD1Q6P587 224 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 SBSNQ6UWP8 590 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 TRIM46Q7Z4K8 759 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 HORMAD1Q86X24 394 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 ENTHD1Q8IYW4 607 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 CRIPAKQ8N1N5 446 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 CELF2-AS1Q8N7Q2 184 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 DNASE1L2Q92874 299 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 MIR1-1HGQ9H1L0 117 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 ZFP14Q9HCL3 533 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-224ENST00000533129 WDR47O94967 919 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 FABP3P05413 133 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 MYCLP1P12525 358 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-224ENST00000533129 MAGP20916 626 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 ACVRL1P37023 503 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 MAGEA11P43364 429 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 CCL23P55773 120 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 ARPC4P59998 168 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 RPP38P78345 283 aaKnown RBP14.38□□□□□ -0.11
CAPN1-224ENST00000533129 NPRL3Q12980 569 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 TTLL9Q3SXZ7 439 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 ATAD3CQ5T2N8 411 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 SUSD1Q6UWL2 747 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 PGBD3Q8N328 593 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 ASCC1Q8N9N2 400 aaKnown RBP14.38□□□□□ -0.11
CAPN1-224ENST00000533129 MDGA1Q8NFP4 955 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 MYDGFQ969H8 173 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 TMEM175Q9BSA9 504 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 PDFQ9HBH1 243 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 LRTM1Q9HBL6 345 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 PLCXD1Q9NUJ7 323 aa14.38□□□□□ -0.11
CAPN1-224ENST00000533129 AGO1Q9UL18 857 aaKnown RBP14.38□□□□□ -0.11
CAPN1-224ENST00000533129 GREB1Q4ZG55 1949 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 DRGXA6NNA5 263 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 PDZK1P1A8MUH7 402 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 EVPLLA8MZ36 301 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 LOC110117498-PIK3R3F6TDL0 507 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 ESR1P03372 595 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 HTR3AP46098 478 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 CLCN7P51798 805 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 TLE2Q04725 743 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 NFE2Q16621 373 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-224ENST00000533129 TRIM60Q495X7 471 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 FBXO43Q4G163 708 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 SLC39A12Q504Y0 691 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 USP39Q53GS9 565 aaKnown RBP14.37□□□□□ -0.11
CAPN1-224ENST00000533129 MLIPQ5VWP3 458 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 MON1AQ86VX9 555 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 P3H2Q8IVL5 708 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 ATG16L2Q8NAA4 619 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 PIK3R3Q92569 461 aa14.37□□□□□ -0.11
CAPN1-224ENST00000533129 FUBP3Q96I24 572 aaKnown RBP eCLIP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms