RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 SRPK3Q9UPE1 567 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 MAU2Q9Y6X3 613 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 FAM169AQ9Y6X4 670 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 FLNCQ14315 2725 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 A0A1B0GX78 115 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 FITM1A5D6W6 292 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 H3BMM5 538 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 CCDC188H7C350 402 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 SLC16A8O95907 504 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 TUBB4AP04350 444 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 CCNFP41002 786 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 FOLR3P41439 243 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 PGDP52209 483 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 PPP1R7Q15435 360 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 WASHC2DQ5SRD0 308 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 FBXO42Q6P3S6 717 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 MBOAT1Q6ZNC8 495 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 KCNMB4Q86W47 210 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 TEX19Q8NA77 164 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 Q8NA96 180 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.03■□□□□ 0.32
SMG1-203ENST00000532700 AARSD1Q9BTE6 412 aaKnown RBP17.03■□□□□ 0.32
SMG1-203ENST00000532700 DHRS4Q9BTZ2 278 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 MFRPQ9BY79 579 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 ENAMQ9NRM1 1142 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 CUEDC1Q9NWM3 386 aaPredicted RBP17.03■□□□□ 0.32
SMG1-203ENST00000532700 ASIC3Q9UHC3 531 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 TAC3Q9UHF0 121 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 PCYOX1Q9UHG3 505 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 SH2B3Q9UQQ2 575 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 DHRS7Q9Y394 339 aa17.03■□□□□ 0.32
SMG1-203ENST00000532700 MAGEB16A2A368 324 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 FFAR3O14843 346 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 DSCR3O14972 297 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 GPR42O15529 346 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 SORBS2O94875 1100 aaKnown RBP17.02■□□□□ 0.32
SMG1-203ENST00000532700 STATHP02808 62 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 UQCRFS1P47985 274 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 PNLIPRP1P54315 467 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 CDKN2DP55273 166 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 TSTA3Q13630 321 aaPredicted RBP17.02■□□□□ 0.32
SMG1-203ENST00000532700 NKG7Q16617 165 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 ARMC3Q5W041 872 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 TTC23LQ6PF05 361 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 PAQR7Q86WK9 346 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 PLD3Q8IV08 490 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 KLHL7Q8IXQ5 586 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 RBMXL3Q8N7X1 1067 aaKnown RBP17.02■□□□□ 0.32
SMG1-203ENST00000532700 C2CD4AQ8NCU7 369 aaPredicted RBP17.02■□□□□ 0.32
SMG1-203ENST00000532700 ASB11Q8WXH4 323 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 KCNJ9Q92806 393 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 SLCO2A1Q92959 643 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 FOPNLQ96NB1 174 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 SOX17Q9H6I2 414 aaPredicted RBP17.02■□□□□ 0.32
SMG1-203ENST00000532700 ZBTB20Q9HC78 741 aaPredicted RBP17.02■□□□□ 0.32
SMG1-203ENST00000532700 ABCF3Q9NUQ8 709 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 P4HTMQ9NXG6 502 aa17.02■□□□□ 0.32
SMG1-203ENST00000532700 GPN3Q9UHW5 284 aaPredicted RBP17.02■□□□□ 0.32
SMG1-203ENST00000532700 DOCK10Q96BY6 2186 aa17.02■□□□□ 0.31
SMG1-203ENST00000532700 TARM1B6A8C7 271 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 E7ENX8 843 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 GFYI3L273 518 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 P2RX6O15547 441 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 ONECUT2O95948 504 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 PGAM1P18669 254 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 IMPA1P29218 277 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 MRPS25P82663 173 aaKnown RBP17.01■□□□□ 0.31
SMG1-203ENST00000532700 TAP2Q03519 686 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 SSPNQ14714 243 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 ZXDCQ2QGD7 858 aaPredicted RBP17.01■□□□□ 0.31
SMG1-203ENST00000532700 HKDC1Q2TB90 917 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 DCAF10Q5QP82 559 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 ZNF425Q6IV72 752 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 TRMT10BQ6PF06 316 aaKnown RBP17.01■□□□□ 0.31
SMG1-203ENST00000532700 SYDE1Q6ZW31 735 aaPredicted RBP17.01■□□□□ 0.31
SMG1-203ENST00000532700 RAB43Q86YS6 212 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 ARHGEF39Q8N4T4 335 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 ZUFSPQ96AP4 578 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 C16orf45Q96MC5 204 aaPredicted RBP17.01■□□□□ 0.31
SMG1-203ENST00000532700 INTS7Q9NVH2 962 aaKnown RBP17.01■□□□□ 0.31
SMG1-203ENST00000532700 ZC3H7BQ9UGR2 993 aaKnown RBP17.01■□□□□ 0.31
SMG1-203ENST00000532700 PADI2Q9Y2J8 665 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 FLNBO75369 2602 aaKnown RBP17.01■□□□□ 0.31
SMG1-203ENST00000532700 NBASA2RRP1 2371 aa17.01■□□□□ 0.31
SMG1-203ENST00000532700 H0YGG7 62 aa17■□□□□ 0.31
SMG1-203ENST00000532700 KIF2AO00139 706 aaPredicted RBP17■□□□□ 0.31
SMG1-203ENST00000532700 SOCS6O14544 535 aa17■□□□□ 0.31
SMG1-203ENST00000532700 SYF2O95926 243 aaKnown RBP17■□□□□ 0.31
SMG1-203ENST00000532700 EIF2S1P05198 315 aaKnown RBP17■□□□□ 0.31
SMG1-203ENST00000532700 EFNA3P52797 238 aa17■□□□□ 0.31
SMG1-203ENST00000532700 ARF3P61204 181 aaPredicted RBP17■□□□□ 0.31
SMG1-203ENST00000532700 GRM7Q14831 915 aa17■□□□□ 0.31
SMG1-203ENST00000532700 PRTGQ2VWP7 1150 aa17■□□□□ 0.31
SMG1-203ENST00000532700 BBS9Q3SYG4 887 aa17■□□□□ 0.31
SMG1-203ENST00000532700 ZC3H12BQ5HYM0 836 aaKnown RBP17■□□□□ 0.31
SMG1-203ENST00000532700 ICE2Q659A1 982 aa17■□□□□ 0.31
SMG1-203ENST00000532700 NEK10Q6ZWH5 1172 aa17■□□□□ 0.31
SMG1-203ENST00000532700 MED25Q71SY5 747 aa17■□□□□ 0.31
SMG1-203ENST00000532700 OVCH1Q7RTY7 1134 aa17■□□□□ 0.31
SMG1-203ENST00000532700 TMEM102Q8N9M5 508 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms